 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Jun 06, 2019 |
| Title |
200928190096_R08C01 |
| Sample type |
genomic |
| |
|
| Source name |
Whole Blood
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Male
age: 23
race: AA
mergedcapsandpsswinthin30days: 1
tei_total_types_experienced_somewitness: NA
childabphyssexemot_ctq_01modandsev: 1
pc1: -0.00582261
pc2: 0.0112249
pc3: 0.00659089
cd8t: 0.164148431
cd4t: 0.179173507
nk: 0.038382495
bcell: 0.051724818
mono: 0.208259601
neu: 0.358311147
age acceleration: -3.145408556
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
AllPrep DNA/RNA Mini Kit (Qiagen, Valencia, CA)
EZ DNA Methylation-GoldTM Kit (Zymo Research, Irvine, CA)
|
| Label |
cy3, cy5
|
| Label protocol |
Illumina Protocol
|
| |
|
| Hybridization protocol |
HumanMethylationEPIC BeadChip
|
| Scan protocol |
BeadStudio
|
| Description |
HumanMethylationEPIC BeadChip - standard protocol
|
| Data processing |
non-normalized, background subtracted beta-values
|
| |
|
| Submission date |
Jun 05, 2019 |
| Last update date |
Nov 22, 2021 |
| Contact name |
Alicia Smith |
| E-mail(s) |
aksmit3@emory.edu
|
| Organization name |
Emory University
|
| Street address |
101 Woodruff Circle
|
| City |
Atlanta |
| ZIP/Postal code |
30322 |
| Country |
USA |
| |
|
| Platform ID |
GPL21145 |
| Series (1) |
| GSE132203 |
DNA Methylation (EPIC) from the Grady Trauma Project |
|
| Supplementary file |
Size |
Download |
File type/resource |
| GSM3853139_200928190096_R08C01_Grn.idat.gz |
7.0 Mb |
(ftp)(http) |
IDAT |
| GSM3853139_200928190096_R08C01_Red.idat.gz |
7.0 Mb |
(ftp)(http) |
IDAT |
| Processed data are available on Series record |
| Processed data included within Sample table |
|
|
|
|
 |
