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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 06, 2019 |
| Title |
201114410014_R07C01 |
| Sample type |
genomic |
| |
|
| Source name |
Whole Blood
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
age: 34
race: AA
mergedcapsandpsswinthin30days: 1
tei_total_types_experienced_somewitness: 8
childabphyssexemot_ctq_01modandsev: 1
pc1: -0.00680275
pc2: -0.00661158
pc3: 0.0144568
cd8t: 0.142861547
cd4t: 0.284542147
nk: 0.038054131
bcell: 0.067292626
mono: 0.113289858
neu: 0.35395969
age acceleration: -2.744337477
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
AllPrep DNA/RNA Mini Kit (Qiagen, Valencia, CA)
EZ DNA Methylation-GoldTM Kit (Zymo Research, Irvine, CA)
|
| Label |
cy3, cy5
|
| Label protocol |
Illumina Protocol
|
| |
|
| Hybridization protocol |
HumanMethylationEPIC BeadChip
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| Scan protocol |
BeadStudio
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| Description |
HumanMethylationEPIC BeadChip - standard protocol
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| Data processing |
non-normalized, background subtracted beta-values
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| |
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| Submission date |
Jun 05, 2019 |
| Last update date |
Nov 22, 2021 |
| Contact name |
Alicia Smith |
| E-mail(s) |
aksmit3@emory.edu
|
| Organization name |
Emory University
|
| Street address |
101 Woodruff Circle
|
| City |
Atlanta |
| ZIP/Postal code |
30322 |
| Country |
USA |
| |
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| Platform ID |
GPL21145 |
| Series (1) |
| GSE132203 |
DNA Methylation (EPIC) from the Grady Trauma Project |
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| Supplementary file |
Size |
Download |
File type/resource |
| GSM3853396_201114410014_R07C01_Grn.idat.gz |
7.1 Mb |
(ftp)(http) |
IDAT |
| GSM3853396_201114410014_R07C01_Red.idat.gz |
7.0 Mb |
(ftp)(http) |
IDAT |
| Processed data are available on Series record |
| Processed data included within Sample table |
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