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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jun 06, 2019 |
| Title |
201114420031_R02C01 |
| Sample type |
genomic |
| |
|
| Source name |
Whole Blood
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
age: 59
race: AA
mergedcapsandpsswinthin30days: 1
tei_total_types_experienced_somewitness: 5
childabphyssexemot_ctq_01modandsev: 1
pc1: 0.00376614
pc2: 0.00456702
pc3: -0.0221269
cd8t: 0.060069756
cd4t: 0.125836247
nk: 0.052729191
bcell: 0.034125354
mono: 0.050474006
neu: 0.676765446
age acceleration: 8.836922417
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| Extracted molecule |
genomic DNA |
| Extraction protocol |
AllPrep DNA/RNA Mini Kit (Qiagen, Valencia, CA)
EZ DNA Methylation-GoldTM Kit (Zymo Research, Irvine, CA)
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| Label |
cy3, cy5
|
| Label protocol |
Illumina Protocol
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| |
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| Hybridization protocol |
HumanMethylationEPIC BeadChip
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| Scan protocol |
BeadStudio
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| Description |
HumanMethylationEPIC BeadChip - standard protocol
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| Data processing |
non-normalized, background subtracted beta-values
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| Submission date |
Jun 05, 2019 |
| Last update date |
Nov 22, 2021 |
| Contact name |
Alicia Smith |
| E-mail(s) |
aksmit3@emory.edu
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| Organization name |
Emory University
|
| Street address |
101 Woodruff Circle
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| City |
Atlanta |
| ZIP/Postal code |
30322 |
| Country |
USA |
| |
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| Platform ID |
GPL21145 |
| Series (1) |
| GSE132203 |
DNA Methylation (EPIC) from the Grady Trauma Project |
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| Supplementary file |
Size |
Download |
File type/resource |
| GSM3853556_201114420031_R02C01_Grn.idat.gz |
7.1 Mb |
(ftp)(http) |
IDAT |
| GSM3853556_201114420031_R02C01_Red.idat.gz |
7.1 Mb |
(ftp)(http) |
IDAT |
| Processed data are available on Series record |
| Processed data included within Sample table |
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