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Sample GSM41307 Query DataSets for GSM41307
Status Public on Jun 30, 2006
Title WT_Gal_Air_6.13_Generations_Rep_2
Sample type RNA
 
Channel 1
Source name WT_Gal_Air_6.13_Generations_Rep_2
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name WT_Gal_Air_Reference
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Sparged, fermentor clutures of a yeast strain (JM43) were aerobically grown on galactose medium (SSG-TEA). At time zero (generation 0) the saprge gas was switched from air to O2-free N2 for 6 generations of anaerobic growth. After six generations, the saprge gas was switched back to air and samples were harvested at 6.13 generations. 30 µg of total RNA was reverse transcribed (Cy3) and hybridized against a reference (Cy5)under the same gas condition, which consisted of a pool of equal masses of RNA from each time point sampled. The data are background-corrected and normalized.
 
Submission date Feb 04, 2005
Last update date Aug 22, 2008
Contact name Kurt E Kwast
E-mail(s) kwast@uiuc.edu
Phone 217-244-3122
Organization name University of Illinois at Urbana-Champaign
Department Molecular & Integrative Physiology
Lab Kwast Lab
Street address 407 S. Goodwin Ave.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platform ID GPL1535
Series (3)
GSE2246 JM43_Galactose_Air_N2_Air_Shift
GSE3705 JM43 cells grown aerobically in galactose and treated with Antimycin A
GSE3706 JM43_Galactose_N2_AntimycinA

Data table header descriptions
ID_REF
VALUE log2 Ratio

Data table
ID_REF VALUE
Q0045 0.593184516
Q0050 0.27766463
Q0055 0.121135264
Q0060 0.106484113
Q0065 0.047891168
Q0070 0.130296946
Q0075 0.174686195
Q0080 0.473893314
Q0085 0.77576366
Q0105 0.571244205
Q0110 0.173942744
Q0115 0.417946065
Q0120 0.508350612
Q0130 0.263226604
Q0140 0.972536862
Q0160 0.33464484
Q0250 0.317668601
Q0255 -0.190855376
Q0275 0.242333333
YAL001C 0.248907588

Total number of rows: 5617

Table truncated, full table size 111 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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