|
| Status |
Public on Mar 11, 2021 |
| Title |
LVAD079 |
| Sample type |
genomic |
| |
|
| Source name |
genomic DNA from cardiac left ventricle
|
| Organism |
Homo sapiens |
| Characteristics |
race: African American
age: 65
tissue: Left Ventricle Endocardium
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted and purified from Human Left Ventricle Pre-LVAD samples using Qiagen DNeasy Kit according to standard instructions
|
| Label |
Cy3, Cy5
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450k Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Data processing |
BeadStudio software v3.2
|
| |
|
| Submission date |
Jan 04, 2021 |
| Last update date |
Mar 11, 2021 |
| Contact name |
Mark Emile Pepin |
| E-mail(s) |
pepinme@gmail.com
|
| Organization name |
University of Alabama at Birmingham
|
| Department |
Biomedical Engineering
|
| Lab |
Adam Wende Laboratory
|
| Street address |
1825 University Blvd
|
| City |
Birmingham |
| State/province |
AL |
| ZIP/Postal code |
35294-2182 |
| Country |
USA |
| |
|
| Platform ID |
GPL21145 |
| Series (2) |
| GSE164195 |
Cardiac DNA Methylation Underlies Racial and Socioeconomic Disparities among Patients with End-Stage Heart Failure (MethylationEPIC array) |
| GSE164197 |
Racial and Socioeconomic Disparity Associates with Differences in Cardiac DNA Methylation among Men with End-Stage Heart Failure |
|
