|
| Status |
Public on Jul 14, 2021 |
| Title |
22000 |
| Sample type |
RNA |
| |
|
| Source name |
Liver
|
| Organism |
Mus musculus |
| Characteristics |
strain: C3H/HeNCrl
radiation: Low-LET
dose: 2Gy
pathology: HCC
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with QIAGEN miRNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Bio-rad Experion System.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Description |
8546243078_B
|
| Data processing |
The data were background subtracted and quantile-quantile normalised using MBCB
|
| |
|
| Submission date |
Feb 11, 2021 |
| Last update date |
Jul 14, 2021 |
| Contact name |
Lianghao Ding |
| E-mail(s) |
lianghao.ding@utsouthwestern.edu
|
| Phone |
214-648-5892
|
| Organization name |
UT Southwestern Medical Center
|
| Street address |
5323 Harry Hines Blvd
|
| City |
Dallas |
| State/province |
TX |
| ZIP/Postal code |
75390 |
| Country |
USA |
| |
|
| Platform ID |
GPL6887 |
| Series (1) |
| GSE166653 |
Gene expression profiles of radiation-induced hepatocellular carcinoma (HCC) in C3H mice |
|
