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Sample GSM571003 Query DataSets for GSM571003
Status Public on Jul 28, 2010
Title DN DC
Sample type RNA
 
Source name spleens
Organism Mus musculus
Characteristics strain: Cx3cr1gfp/+ C57BL/6
bmp4 treated: -
dendritic cell: CD4+
Growth protocol After collagenase D digestion, spleens from Cx3cr1gfp/+ C57BL/6 mice were enriched for CD11c+ cells by magnetic separation according to the manufacturer’s protocol (MiltenyiBiotec GmbH). Splenic CD11chi cells were isolated using the FACS ARIA high-speed sorter (Becton-Dickinson).
Extracted molecule total RNA
Extraction protocol QIAGEN miniRNA extraction kit was used.
Label biotin
Label protocol According to Affymetrix manual
 
Hybridization protocol According to Affymetrix manual
Scan protocol According to Affymetrix manual
Data processing MAS5
 
Submission date Jul 27, 2010
Last update date Apr 10, 2013
Contact name Steffen Jung
E-mail(s) s.jung@weizmann.ac.il
Phone 0097289342787
Organization name The Weizmann Institute of Science
Department Immunology and Regenerative Biology
Lab Steffen Jung
Street address Herzl
City REHOVOT
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL1261
Series (1)
GSE23212 Gene expression profiling of mouse splenic Dendritic cells subsets
Relations
Reanalyzed by GSE45704

Data table header descriptions
ID_REF
VALUE signal intensities
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
1449898_at 127.3 P 0.018555
1423472_at 379.1 P 0.005859
1423473_at 0.9 A 0.962402
1417414_at 413 P 0.00415
1444778_at 89.4 P 0.00293
1448729_a_at 40.2 A 0.171387
1455422_x_at 3.2 A 0.80542
1420876_a_at 197.2 P 0.018555
1420877_at 112.2 P 0.00293
1424181_at 1087.7 P 0.000244
1431973_at 39.6 A 0.149658
1436819_at 223 P 0.000732
1460286_at 60.8 P 0.037598
1437995_x_at 160.4 P 0.008057
1454610_at 2333.4 P 0.000244
1426801_at 2.3 A 0.976074
1426802_at 58.4 A 0.19458
1417038_at 528.8 A 0.067627
1448903_at 625.7 P 0.000244
1454525_at 25 A 0.095215

Total number of rows: 45101

Table truncated, full table size 1193 Kbytes.




Supplementary file Size Download File type/resource
GSM571003.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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