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Sample GSM652524 Query DataSets for GSM652524
Status Public on Jan 10, 2012
Title genomic DNA from Normal PBL 56
Sample type genomic
 
Source name genomic DNA from Normal PBL 56
Organism Homo sapiens
Characteristics cell type: Peripheral Blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted DNeasy blood and tissue kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 4776148012_A
Data processing BeadStudio software v3.2
 
Submission date Jan 11, 2011
Last update date Jan 10, 2012
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platform ID GPL8490
Series (1)
GSE26543 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

Data table header descriptions
ID_REF
VALUE Average Beta (0-1 constrained)

Data table
ID_REF VALUE
cg00000292 0.783089
cg00002426 0.7297971
cg00003994 0.04323284
cg00005847 0.1368785
cg00006414 0.04955074
cg00007981 0.02589928
cg00008493 0.9664429
cg00008713 0.02642727
cg00009407 0.0145513
cg00010193 0.6138043
cg00011459 0.8638607
cg00012199 0.0166811
cg00012386 0.02040421
cg00012792 0.01634314
cg00013618 0.8174201
cg00014085 0.02197621
cg00014837 0.7583524
cg00015770 0.3308492
cg00016968 0.7593113
cg00019495 0.2951053

Total number of rows: 27578

Table truncated, full table size 578 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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