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Sample GSM652560 Query DataSets for GSM652560
Status Public on Jan 10, 2012
Title genomic DNA from Normal PBL 92
Sample type genomic
 
Source name genomic DNA from Normal PBL 92
Organism Homo sapiens
Characteristics cell type: Peripheral Blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted DNeasy blood and tissue kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 4776148030_A
Data processing BeadStudio software v3.2
 
Submission date Jan 11, 2011
Last update date Jan 10, 2012
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platform ID GPL8490
Series (1)
GSE26543 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

Data table header descriptions
ID_REF
VALUE Average Beta (0-1 constrained)

Data table
ID_REF VALUE
cg00000292 0.7695035
cg00002426 0.7216321
cg00003994 0.08782018
cg00005847 0.289866
cg00006414 0.1097645
cg00007981 0.05252246
cg00008493 0.9453564
cg00008713 0.02998917
cg00009407 0.02223349
cg00010193 0.6147994
cg00011459 0.7314876
cg00012199 0.03285214
cg00012386 0.030098
cg00012792 0.02576224
cg00013618 0.8443601
cg00014085 0.03412746
cg00014837 0.7224618
cg00015770 0.1965702
cg00016968 0.784672
cg00019495 0.2481932

Total number of rows: 27578

Table truncated, full table size 576 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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