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Sample GSM652586 Query DataSets for GSM652586
Status Public on Jan 10, 2012
Title genomic DNA from Normal PBL 118
Sample type genomic
 
Source name genomic DNA from Normal PBL 118
Organism Homo sapiens
Characteristics cell type: Peripheral Blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted DNeasy blood and tissue kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 4776148043_G
Data processing BeadStudio software v3.2
 
Submission date Jan 11, 2011
Last update date Jan 10, 2012
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platform ID GPL8490
Series (1)
GSE26543 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

Data table header descriptions
ID_REF
VALUE Average Beta (0-1 constrained)

Data table
ID_REF VALUE
cg00000292 0.7183749
cg00002426 0.7682194
cg00003994 0.05254569
cg00005847 0.1498638
cg00006414 0.09774614
cg00007981 0.03317972
cg00008493 0.9568459
cg00008713 0.0320259
cg00009407 0.03011394
cg00010193 0.6029181
cg00011459 0.7623359
cg00012199 0.03625827
cg00012386 0.02232832
cg00012792 0.01806002
cg00013618 0.8454362
cg00014085 0.04551451
cg00014837 0.758027
cg00015770 0.1208183
cg00016968 0.7664989
cg00019495 0.1594203

Total number of rows: 27578

Table truncated, full table size 577 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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