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Sample GSM652608 Query DataSets for GSM652608
Status Public on Jan 10, 2012
Title genomic DNA from Normal PBL 140
Sample type genomic
 
Source name genomic DNA from Normal PBL 140
Organism Homo sapiens
Characteristics cell type: Peripheral Blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted DNeasy blood and tissue kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 4776148050_A
Data processing BeadStudio software v3.2
 
Submission date Jan 11, 2011
Last update date Jan 10, 2012
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platform ID GPL8490
Series (1)
GSE26543 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

Data table header descriptions
ID_REF
VALUE Average Beta (0-1 constrained)

Data table
ID_REF VALUE
cg00000292 0.742732
cg00002426 0.7162522
cg00003994 0.06405078
cg00005847 0.123178
cg00006414 0.05354559
cg00007981 0.02915894
cg00008493 0.9651868
cg00008713 0.02148587
cg00009407 0.01866752
cg00010193 0.5796971
cg00011459 0.7553264
cg00012199 0.02514368
cg00012386 0.02086616
cg00012792 0.02035015
cg00013618 0.781837
cg00014085 0.03023084
cg00014837 0.6924075
cg00015770 0.09015205
cg00016968 0.8019491
cg00019495 0.200147

Total number of rows: 27578

Table truncated, full table size 578 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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