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Sample GSM652623 Query DataSets for GSM652623
Status Public on Jan 10, 2012
Title genomic DNA from Normal PBL 155
Sample type genomic
 
Source name genomic DNA from Normal PBL 155
Organism Homo sapiens
Characteristics cell type: Peripheral Blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted DNeasy blood and tissue kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 4776148054_E
Data processing BeadStudio software v3.2
 
Submission date Jan 11, 2011
Last update date Jan 10, 2012
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platform ID GPL8490
Series (1)
GSE26543 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

Data table header descriptions
ID_REF
VALUE Average Beta (0-1 constrained)

Data table
ID_REF VALUE
cg00000292 0.7935382
cg00002426 0.8285714
cg00003994 0.04879608
cg00005847 0.2655647
cg00006414 0.07899629
cg00007981 0.0442327
cg00008493 0.9483214
cg00008713 0.01998301
cg00009407 0.02593149
cg00010193 0.6480737
cg00011459 0.8530806
cg00012199 0.03629947
cg00012386 0.02895403
cg00012792 0.02339421
cg00013618 0.8453619
cg00014085 0.03037213
cg00014837 0.7856441
cg00015770 0.1015822
cg00016968 0.7883907
cg00019495 0.3151882

Total number of rows: 27578

Table truncated, full table size 577 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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