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Sample GSM652645 Query DataSets for GSM652645
Status Public on Jan 10, 2012
Title genomic DNA from Normal PBL 177
Sample type genomic
 
Source name genomic DNA from Normal PBL 177
Organism Homo sapiens
Characteristics cell type: Peripheral Blood
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted DNeasy blood and tissue kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 4948000012_C
Data processing BeadStudio software v3.2
 
Submission date Jan 11, 2011
Last update date Jan 10, 2012
Contact name Scott M Langevin
E-mail(s) langevst@uc.edu
Phone 513-558-1066
Organization name University of Cincinnati College of Medicine
Department Department of Environmental Health
Lab Langevin
Street address 160 Panzeca Way, ML0056
City Cincinnati
State/province OH
ZIP/Postal code 45267
Country USA
 
Platform ID GPL8490
Series (1)
GSE26543 The influence of aging, environmental exposures and local sequence features on the variation of DNA methylation in blood

Data table header descriptions
ID_REF
VALUE Average Beta (0-1 constrained)

Data table
ID_REF VALUE
cg00000292 0.7193483
cg00002426 0.734397
cg00003994 0.07181227
cg00005847 0.2102221
cg00006414 0.0552979
cg00007981 0.0473542
cg00008493 0.9703701
cg00008713 0.03595752
cg00009407 0.01368795
cg00010193 0.541635
cg00011459 0.7395116
cg00012199 0.02320688
cg00012386 0.02325768
cg00012792 0.02083118
cg00013618 0.8345946
cg00014085 0.0411703
cg00014837 0.7412088
cg00015770 0.1745567
cg00016968 0.824101
cg00019495 0.1297733

Total number of rows: 27578

Table truncated, full table size 577 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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