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Status |
Public on May 29, 2013 |
Title |
Human neural progenitor cells, biological rep2 |
Sample type |
RNA |
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|
Source name |
85 NPC miRNA 4-23-10_(miRNA-1_0_2Xgain).CEL
|
Organism |
Homo sapiens |
Characteristics |
source tissue: Fetal brain source tissue gestation: 84 days in utero cell type: neural progenitor cells
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Treatment protocol |
Dissociated fetal tissue is placed in neural progentior media for 1 week to give rise to neurospheres or neural progenitor cells (NPCs).
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Extracted molecule |
total RNA |
Extraction protocol |
NPCs were placed in differentiation media for 2-3weeks to differentiate into neurons.
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Label |
FlashTag Biotin HSR labeling was performed according to the Genisphere protocol from 200ng total RNA (Genisphere Technical Support).
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Label protocol |
FlashTag Biotin HSR labeling was performed according to the Genisphere protocol from 200ng total RNA (Genisphere Technical Support).
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Hybridization protocol |
Hybridization was performed according to the affymetrix protocol. GeneChips were washed and stained in the Affymetrix Gene chip system.
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Scan protocol |
miRNA GeneChips were scanned using the Affymetrix GeneChip Scanner 3000 7G
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Description |
miRNA expression data from neural progenitor cells
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Data processing |
The data were analyzed using the Partek Genomics Suite and probe sets mapped to genes using the database for annotation.
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Submission date |
Nov 29, 2011 |
Last update date |
May 29, 2013 |
Contact name |
Sowmya V Yelamanchili |
E-mail(s) |
syelamanchili@unmc.edu
|
Phone |
402-559-5348
|
Organization name |
University of Nebraska Medical center
|
Department |
Pharmacology and Experimental Neuroscience
|
Street address |
985800 Nebraska Medical Center - DRC 1 3008
|
City |
Omaha, |
State/province |
NE |
ZIP/Postal code |
68198-5800 |
Country |
USA |
|
|
Platform ID |
GPL8786 |
Series (1) |
GSE34016 |
MicroRNAs in neuronal differentiation |
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