|
| Status |
Public on Oct 23, 2013 |
| Title |
active tuberculosis HIV negative South Africa WB_1_SA_20354 |
| Sample type |
RNA |
| |
|
| Source name |
Whole Blood from patient with Active TB
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: active tuberculosis
hiv status: HIV negative
geographical region: South Africa
tissue: whole blood
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Standard PAXgene® blood RNA extraction kit protocol (Qiagen).
|
| Label |
biotin
|
| Label protocol |
Standard Illumina TotalPrep RNA Amplification kits (Applied Biosystems).
|
| |
|
| Hybridization protocol |
Standard Illumina hybridisation protocol.
|
| Scan protocol |
Standard Illumina scanning protocol.
|
| Description |
Sample name: 5667664047_B
|
| Data processing |
The data were normalised using Genome Studio, with background subtracted and quantile normalised.
|
| |
|
| Submission date |
Apr 13, 2012 |
| Last update date |
Nov 30, 2020 |
| Contact name |
Victoria Wright |
| E-mail(s) |
v.wright@imperial.ac.uk
|
| Organization name |
Imperial College London
|
| Department |
Paediatrics
|
| Lab |
Wright Fleming Institute
|
| Street address |
Norfolk Place
|
| City |
London |
| ZIP/Postal code |
W2 1PG |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE37250 |
Genome-wide transcriptional profiling of HIV positive and negative adults with active tuberculosis, latent TB infection and other diseases |
|
| Relations |
| Reanalyzed by |
GSE162330 |
