|
Status |
Public on Oct 17, 2012 |
Title |
Twin_Pair_12_affected |
Sample type |
genomic |
|
|
Source name |
Whole blood
|
Organism |
Homo sapiens |
Characteristics |
gender: Female tissue: Whole blood twin pair: Pair_12 disease status: breast cancer sample
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA samples from blood were extracted from thawed frozen whole blood collected in EDTA using the Nucleon Genomic DNA Extraction Kit BACC3
|
Label |
Cy3, Cy5
|
Label protocol |
Standard Illumina labelling protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
|
Description |
1002206
|
Data processing |
Genome Studio V2011.1 Average Beta, P-value, Unmethylated and methylated signal intensities
|
|
|
Submission date |
May 14, 2012 |
Last update date |
Oct 17, 2012 |
Contact name |
Manel Esteller |
Organization name |
IDIBELL
|
Department |
PEBC
|
Lab |
Cancer Epigenetics
|
Street address |
Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
|
City |
L'Hospitalet de Llobregat |
State/province |
Barcelona |
ZIP/Postal code |
08908 |
Country |
Spain |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE37965 |
DNA methylation profiling in breast cancer discordant identical twins |
|