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    PLS1 plastin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714391, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PLS1provided by VGNC
    Official Full Name
    plastin 1provided by VGNC
    Primary source
    VGNC:VGNC:110348
    Locus tag
    EGK_16391
    See related
    Ensembl:ENSMMUG00000055990
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See PLS1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (44714280..44825884)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (159146831..159275672, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene 5'-3' exoribonuclease 1 Neighboring gene U1 spliceosomal RNA Neighboring gene eukaryotic translation initiation factor 2-alpha kinase 1 pseudogene Neighboring gene ATR serine/threonine kinase Neighboring gene transient receptor potential cation channel subfamily C member 1 Neighboring gene U7 small nuclear RNA Neighboring gene 60S ribosomal protein L8 pseudogene Neighboring gene procollagen C-endopeptidase enhancer 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin filament bundle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plastin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      44714280..44825884
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843750.1 → XP_028699583.1  plastin-1 isoform X1

      UniProtKB/TrEMBL
      A0A5F7ZDD0, A0A8J8Y327, F7EA87
      Related
      ENSMMUP00000062644.1, ENSMMUT00000098220.1
      Conserved Domains (3) summary
      COG5069
      Location:13 → 621
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:391 → 508
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    2. XM_028843751.1 → XP_028699584.1  plastin-1 isoform X2

      Conserved Domains (1) summary
      COG5069
      Location:13 → 546
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]

    3. XM_028843752.1 → XP_028699585.1  plastin-1 isoform X3

      Conserved Domains (1) summary
      COG5069
      Location:13 → 547
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
    Nucleotide Protein
    Heading Accession and Version

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