naa15b N-alpha-acetyltransferase 15, NatA auxiliary subunit b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: naa15bprovided by ZNC
Official Full Name: N-alpha-acetyltransferase 15, NatA auxiliary subunit bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-6031
See related: Ensembl:ENSDARG00000030368 AllianceGenome:ZFIN:ZDB-GENE-030131-6031
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: narg1b; fi31d06; wu:fi31d06
Summary: Predicted to contribute to peptide alpha-N-acetyltransferase activity. Acts upstream of or within myotome development. Predicted to be part of NatA complex. Predicted to be active in cytoplasm. Is expressed in eye; immature eye; midbrain; optic tectum; and somite. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 50. Orthologous to human NAA15 (N-alpha-acetyltransferase 15, NatA auxiliary subunit). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 1

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (40613297..40641474)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (39895224..39923401)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fj88d10.x1 (e-PCR)
- UniSTS:200213

fi31d06.x1 (e-PCR)
- UniSTS:197261

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in N-terminal peptidyl-methionine acetylation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within myotome development	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
part_of NatA complex	IBA Inferred from Biological aspect of Ancestor more info
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: N-alpha-acetyltransferase 15, NatA auxiliary subunit b

Names: NMDA receptor-regulated gene 1b; transcriptional coactivator tubedown-100

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_203321.2 → NP_976066.2 N-alpha-acetyltransferase 15, NatA auxiliary subunit b

Status: VALIDATED

Source sequence(s)

BX511216, CU856624, FO904879

UniProtKB/TrEMBL

A0A0R4I9S5, A0A8M1PEL4

Related

ENSDARP00000130499.2, ENSDART00000168067.2

Conserved Domains (3) summary

sd00006
Location:82 → 108

TPR; TPR repeat [structural motif]

pfam12569
Location:187 → 698

NARP1; NMDA receptor-regulated protein 1

pfam13414
Location:82 → 145

TPR_11; TPR repeat