U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Potefam3c POTE ankyrin domain family member 3C [ Mus musculus (house mouse) ]

    Gene ID: 670593, updated on 8-Feb-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Potefam3cprovided by MGI
    Official Full Name
    POTE ankyrin domain family member 3Cprovided by MGI
    Primary source
    MGI:MGI:3779905
    See related
    Ensembl:ENSMUSG00000107280 AllianceGenome:MGI:3779905
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm9495; Pote3c
    Expression
    Restricted expression toward testis adult (RPKM 24.4) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Potefam3c in Genome Data Viewer
    Location:
    8 B3.3; 8 33.88 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (69873342..69906699, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (69420690..69454048, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 1 pseudogene Neighboring gene predicted gene 10033 Neighboring gene STARR-seq mESC enhancer starr_21735 Neighboring gene STARR-positive B cell enhancer mm9_chr8:71994362-71994663 Neighboring gene POTE ankyrin domain family member 3D Neighboring gene STARR-seq mESC enhancer starr_21736 Neighboring gene ribosomal protein S7, pseudogene 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative POTE ankyrin domain family member M; uncharacterized protein Potefam3c

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      69873342..69906699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017313037.2 → XP_017168526.1  uncharacterized protein Potefam3c isoform X1

      Conserved Domains (3) summary
      pfam05109
      Location:368 → 516
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      sd00045
      Location:86 → 115
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:89 → 180
      Ank_2; Ankyrin repeats (3 copies)

    2. XM_001475988.6 → XP_001476038.2  putative POTE ankyrin domain family member M isoform X2

      UniProtKB/TrEMBL
      A0A0J9YUZ3, B9EK96
      Related
      ENSMUSP00000144411.2, ENSMUST00000200846.2
      Conserved Domains (2) summary
      sd00045
      Location:86 → 115
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:89 → 180
      Ank_2; Ankyrin repeats (3 copies)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.