mitd1 MIT, microtubule interacting and transport, domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mitd1provided by ZNC
Official Full Name: MIT, microtubule interacting and transport, domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-923
See related: Ensembl:ENSDARG00000044766 AllianceGenome:ZFIN:ZDB-GENE-040426-923
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:56159
Summary: Predicted to be involved in midbody abscission. Predicted to colocalize with midbody. Orthologous to human MITD1 (microtubule interacting and trafficking domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (7275185..7287126, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (7296794..7308735, complement)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info
involved_in midbody abscission	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info
colocalizes_with midbody	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: MIT domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200201.2 → NP_956495.2 MIT domain-containing protein 1

Status: VALIDATED

Source sequence(s)

BX942813

Related

ENSDARP00000143471.2, ENSDART00000176281.2

Conserved Domains (2) summary

cd02683
Location:8 → 84

MIT_1; MIT: domain contained within Microtubule Interacting and Trafficking molecules. This sub-family of MIT domains is found in proteins with unknown function, co-occuring with an as yet undescribed domain. The molecular function of the MIT domain is unclear.

pfam16565
Location:98 → 239

MIT_C; Phospholipase D-like domain at C-terminus of MIT