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    C43H6.6 C-type LECtin [ Caenorhabditis elegans ]

    Gene ID: 183425, updated on 7-Sep-2023

    Summary

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    Gene symbol
    C43H6.6
    Gene description
    C-type LECtin
    Primary source
    WormBase:WBGene00016619
    Locus tag
    CELE_C43H6.6
    See related
    AllianceGenome:WB:WBGene00016619
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in negative regulation of inflammatory response. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See C43H6.6 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Sequence:
    Chromosome: X; NC_003284.9 (2395283..2398827)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Bravo_FIGEY domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Palmitoyltransferase Neighboring gene PH domain-containing protein Neighboring gene ANK_REP_REGION domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    C-type LECtin
    NP_508433.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      2395283..2398827
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076032.4 → NP_508433.2  C-type LECtin [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508433.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WFK8
      Conserved Domains (2) summary
      smart00034
      Location:157 → 284
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      cd00041
      Location:32 → 150
      CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    Nucleotide Protein
    Heading Accession and Version

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