sec61g SEC61 translocon subunit gamma [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: sec61gprovided by ZNC
Official Full Name: SEC61 translocon subunit gammaprovided by ZNC
Primary source: ZFIN:ZDB-GENE-040718-203
See related: Ensembl:ENSDARG00000018637 AllianceGenome:ZFIN:ZDB-GENE-040718-203
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:92840
Summary: Predicted to enable protein transmembrane transporter activity. Predicted to be involved in posttranslational protein targeting to membrane, translocation. Predicted to act upstream of or within protein targeting. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of Ssh1 translocon complex. Is expressed in axis; hatching gland; notochord; pancreas; and polster. Orthologous to human SEC61G (SEC61 translocon subunit gamma). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (18444189..18446647, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (18299770..18302228, complement)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fb78b09.x1 (e-PCR)
- UniSTS:187558

fk20h02.y1 (e-PCR)
- UniSTS:200644

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables protein transmembrane transporter activity	IBA Inferred from Biological aspect of Ancestor more info
enables protein transmembrane transporter activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within intracellular protein transport	IEA Inferred from Electronic Annotation more info
involved_in post-translational protein targeting to membrane, translocation	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein targeting	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of Ssh1 translocon complex	IBA Inferred from Biological aspect of Ancestor more info
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: protein transport protein Sec61 subunit gamma

Names: SEC61 translocon gamma subunit; Sec61 gamma subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.