FSD2 fibronectin type III and SPRY domain containing 2 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: FSD2provided by VGNC
Official Full Name: fibronectin type III and SPRY domain containing 2provided by VGNC
Primary source: VGNC:VGNC:40995
See related: Ensembl:ENSCAFG00845003925
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	3	NC_051807.1 (54999833..55041910, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	3	NC_006585.4 (57220862..57262957, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	3	NC_049224.1 (55071232..55113028, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	3	NC_049263.1 (54519891..54561652, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	3	NC_049744.1 (54728732..54770737, complement)

Chromosome 3 - NC_051807.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: fibronectin type III and SPRY domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051807.1 Reference ROS_Cfam_1.0

Range

54999833..55041910 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038661449.1 → XP_038517377.1 fibronectin type III and SPRY domain-containing protein 2

UniProtKB/TrEMBL

A0A8C0LVY6, A0A8I3MRI9, A0A8I3MSB5

Conserved Domains (3) summary

PRK12704
Location:182 → 322

PRK12704; phosphodiesterase; Provisional

cd00063
Location:359 → 456

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:555 → 729

SPRY; SPRY domain
XM_038661448.1 → XP_038517376.1 fibronectin type III and SPRY domain-containing protein 2

UniProtKB/TrEMBL

A0A8C0LVY6, A0A8I3MRI9, A0A8I3MSB5

Related

ENSCAFP00845005637.1, ENSCAFT00845007068.1

Conserved Domains (3) summary

PRK12704
Location:182 → 322

PRK12704; phosphodiesterase; Provisional

cd00063
Location:359 → 456

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:555 → 729

SPRY; SPRY domain

Alternate UMICH_Zoey_3.1

Genomic

NC_049263.1 Alternate UMICH_Zoey_3.1

Range

54519891..54561652 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038472006.1 → XP_038327934.1 fibronectin type III and SPRY domain-containing protein 2
XM_038472005.1 → XP_038327933.1 fibronectin type III and SPRY domain-containing protein 2

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049744.1 Alternate UNSW_CanFamBas_1.0

Range

54728732..54770737 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038597275.1 → XP_038453203.1 fibronectin type III and SPRY domain-containing protein 2

Conserved Domains (3) summary

PRK12704
Location:182 → 322

PRK12704; phosphodiesterase; Provisional

cd00063
Location:359 → 456

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:555 → 729

SPRY; SPRY domain
XM_038597274.1 → XP_038453202.1 fibronectin type III and SPRY domain-containing protein 2

Conserved Domains (3) summary

PRK12704
Location:182 → 322

PRK12704; phosphodiesterase; Provisional

cd00063
Location:359 → 456

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:555 → 729

SPRY; SPRY domain

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049224.1 Alternate UU_Cfam_GSD_1.0

Range

55071232..55113028 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038532946.1 → XP_038388874.1 fibronectin type III and SPRY domain-containing protein 2

UniProtKB/TrEMBL

A0A8C0Q3A2, A0A8I3MSB5
XM_038532945.1 → XP_038388873.1 fibronectin type III and SPRY domain-containing protein 2

UniProtKB/TrEMBL

A0A8C0Q3A2, A0A8I3MSB5

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

57220862..57262957 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_847033.6 → XP_852126.1 fibronectin type III and SPRY domain-containing protein 2

See identical proteins and their annotated locations for XP_852126.1

UniProtKB/TrEMBL

A0A8C0LVY6, A0A8I3MRI9, A0A8I3MSB5

Conserved Domains (3) summary

PRK12704
Location:182 → 322

PRK12704; phosphodiesterase; Provisional

cd00063
Location:359 → 456

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:555 → 729

SPRY; SPRY domain
XM_005618392.4 → XP_005618449.1 fibronectin type III and SPRY domain-containing protein 2

See identical proteins and their annotated locations for XP_005618449.1

UniProtKB/TrEMBL

A0A8C0LVY6, A0A8I3MRI9, A0A8I3MSB5

Conserved Domains (3) summary

PRK12704
Location:182 → 322

PRK12704; phosphodiesterase; Provisional

cd00063
Location:359 → 456

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

cl02614
Location:555 → 729

SPRY; SPRY domain