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    LOC479822 acyl-coenzyme A synthetase ACSM2A, mitochondrial [ Canis lupus familiaris (dog) ]

    Gene ID: 479822, updated on 22-Jan-2024

    Summary

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    Gene symbol
    LOC479822
    Gene description
    acyl-coenzyme A synthetase ACSM2A, mitochondrial
    See related
    Ensembl:ENSCAFG00845007907
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    ACSM2A
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    Genomic context

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    See LOC479822 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (25021437..25050364, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (39180062..39208987)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (25105579..25134524, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (24822297..24851221, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (24717429..24746348, complement)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene acyl-coenzyme A synthetase ACSM1, mitochondrial-like Neighboring gene uncharacterized LOC111096289 Neighboring gene uncharacterized LOC119872188 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene acyl-CoA synthetase medium chain family member 5 Neighboring gene uncharacterized LOC119872189 Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene uromodulin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables fatty acid ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables fatty-acyl-CoA synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in acyl-CoA metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial matrix IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acyl-coenzyme A synthetase ACSM2A, mitochondrial; acyl-coenzyme A synthetase ACSM2B, mitochondrial
    Names
    acyl-CoA synthetase medium-chain family member 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      25021437..25050364 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038669000.1 → XP_038524928.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A8C0RUN3, A0A8I3RU72, A0A8P0NZE7, A0A8P0TA37
      Related
      ENSCAFP00845010799.1, ENSCAFT00845013934.1
      Conserved Domains (1) summary
      cl17068
      Location:40 → 569
      AFD_class_I; Adenylate forming domain, Class I superfamily

    2. XM_038669001.1 → XP_038524929.1  acyl-coenzyme A synthetase ACSM2B, mitochondrial isoform X5

      UniProtKB/TrEMBL
      A0A8C0LB43
      Conserved Domains (1) summary
      cl17068
      Location:59 → 509
      AFD_class_I; Adenylate forming domain, Class I superfamily

    3. XM_038668998.1 → XP_038524926.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37
      Conserved Domains (1) summary
      cl17068
      Location:59 → 579
      AFD_class_I; Adenylate forming domain, Class I superfamily

    4. XM_038668997.1 → XP_038524925.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37
      Conserved Domains (1) summary
      cl17068
      Location:59 → 588
      AFD_class_I; Adenylate forming domain, Class I superfamily

    5. XM_038668999.1 → XP_038524927.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8I3N9X7, A0A8P0NTT6
      Related
      ENSCAFP00845010999.1, ENSCAFT00845014186.1
      Conserved Domains (1) summary
      cl17068
      Location:59 → 563
      AFD_class_I; Adenylate forming domain, Class I superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      24822297..24851221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038478959.1 → XP_038334887.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X4

      Conserved Domains (1) summary
      cl17068
      Location:40 → 569
      AFD_class_I; Adenylate forming domain, Class I superfamily

    2. XM_038478960.1 → XP_038334888.1  acyl-coenzyme A synthetase ACSM2B, mitochondrial isoform X5

      Conserved Domains (1) summary
      cl17068
      Location:59 → 509
      AFD_class_I; Adenylate forming domain, Class I superfamily

    3. XM_038478957.1 → XP_038334885.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X2

      Conserved Domains (1) summary
      cl17068
      Location:59 → 579
      AFD_class_I; Adenylate forming domain, Class I superfamily

    4. XM_038478956.1 → XP_038334884.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl17068
      Location:59 → 588
      AFD_class_I; Adenylate forming domain, Class I superfamily

    5. XM_038478958.1 → XP_038334886.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X3

      Conserved Domains (1) summary
      cl17068
      Location:59 → 563
      AFD_class_I; Adenylate forming domain, Class I superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      24717429..24746348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038604288.1 → XP_038460216.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X4

      Conserved Domains (1) summary
      cl17068
      Location:40 → 569
      AFD_class_I; Adenylate forming domain, Class I superfamily

    2. XM_038604289.1 → XP_038460217.1  acyl-coenzyme A synthetase ACSM2B, mitochondrial isoform X5

      Conserved Domains (1) summary
      cl17068
      Location:59 → 509
      AFD_class_I; Adenylate forming domain, Class I superfamily

    3. XM_038604286.1 → XP_038460214.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X2

      Conserved Domains (1) summary
      cl17068
      Location:59 → 579
      AFD_class_I; Adenylate forming domain, Class I superfamily

    4. XM_038604285.1 → XP_038460213.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X1

      Conserved Domains (1) summary
      cl17068
      Location:59 → 588
      AFD_class_I; Adenylate forming domain, Class I superfamily

    5. XM_038604287.1 → XP_038460215.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X3

      Conserved Domains (1) summary
      cl17068
      Location:59 → 563
      AFD_class_I; Adenylate forming domain, Class I superfamily

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      25105579..25134524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038540196.1 → XP_038396124.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37

    2. XM_038540197.1 → XP_038396125.1  acyl-coenzyme A synthetase ACSM2B, mitochondrial isoform X5

      UniProtKB/TrEMBL
      A0A8C0LB43

    3. XM_038540194.1 → XP_038396122.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37

    4. XM_038540193.1 → XP_038396121.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37

    5. XM_038540195.1 → XP_038396123.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8I3N9X7, A0A8P0NTT6

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      39180062..39208987
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536949.6 → XP_536949.3  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X4

      UniProtKB/TrEMBL
      A0A8C0RUN3, A0A8I3RU72, A0A8P0NZE7, A0A8P0TA37
      Conserved Domains (1) summary
      cl17068
      Location:40 → 569
      AFD_class_I; Adenylate forming domain, Class I superfamily

    2. XM_038548847.1 → XP_038404775.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8I3N9X7, A0A8P0NTT6
      Conserved Domains (1) summary
      cl17068
      Location:59 → 563
      AFD_class_I; Adenylate forming domain, Class I superfamily

    3. XM_038548857.1 → XP_038404785.1  acyl-coenzyme A synthetase ACSM2B, mitochondrial isoform X5

      UniProtKB/TrEMBL
      A0A8C0LB43
      Conserved Domains (1) summary
      cl17068
      Location:59 → 509
      AFD_class_I; Adenylate forming domain, Class I superfamily

    4. XM_038548839.1 → XP_038404767.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37
      Conserved Domains (1) summary
      cl17068
      Location:59 → 579
      AFD_class_I; Adenylate forming domain, Class I superfamily

    5. XM_038548830.1 → XP_038404758.1  acyl-coenzyme A synthetase ACSM2A, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8I3RU72, A0A8P0TA37
      Conserved Domains (1) summary
      cl17068
      Location:59 → 588
      AFD_class_I; Adenylate forming domain, Class I superfamily
    Nucleotide Protein
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