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    NFYC nuclear transcription factor Y subunit gamma [ Canis lupus familiaris (dog) ]

    Gene ID: 475312, updated on 5-Mar-2024

    Summary

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    Official Symbol
    NFYCprovided by VGNC
    Official Full Name
    nuclear transcription factor Y subunit gammaprovided by VGNC
    Primary source
    VGNC:VGNC:43792
    See related
    Ensembl:ENSCAFG00845009374
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See NFYC in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (2357425..2424064, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (2526350..2593255, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (2338799..2405699, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (2262892..2329774, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (2322964..2389860, complement)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 Neighboring gene uncharacterized LOC111098942 Neighboring gene potassium voltage-gated channel subfamily Q member 4 Neighboring gene microRNA mir-30c-1 Neighboring gene microRNA mir-30e Neighboring gene regulating synaptic membrane exocytosis 3 Neighboring gene uncharacterized LOC119869316 Neighboring gene protein mago nashi homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCAAT-binding factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear transcription factor Y subunit gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      2357425..2424064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687389.1 → XP_038543317.1  nuclear transcription factor Y subunit gamma isoform X2

      UniProtKB/TrEMBL
      A0A8C0JQA3, A0A8C0PDK1, A0A8C0PHK5, A0A8I3NC83, A0A8I3RWU0
      Related
      ENSCAFP00845012874.1, ENSCAFT00845016552.1
      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    2. XM_038687390.1 → XP_038543318.1  nuclear transcription factor Y subunit gamma isoform X2

      UniProtKB/TrEMBL
      A0A8C0JQA3, A0A8C0PDK1, A0A8C0PHK5, A0A8I3NC83, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    3. XM_038687388.1 → XP_038543316.1  nuclear transcription factor Y subunit gamma isoform X1

      UniProtKB/TrEMBL
      A0A8C0PHK5, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 98
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      2262892..2329774 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038495376.1 → XP_038351304.1  nuclear transcription factor Y subunit gamma isoform X2

      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    2. XM_038495377.1 → XP_038351305.1  nuclear transcription factor Y subunit gamma isoform X2

      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    3. XM_038495375.1 → XP_038351303.1  nuclear transcription factor Y subunit gamma isoform X1

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      2322964..2389860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038621606.1 → XP_038477534.1  nuclear transcription factor Y subunit gamma isoform X2

      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    2. XM_038621607.1 → XP_038477535.1  nuclear transcription factor Y subunit gamma isoform X2

      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    3. XM_038621605.1 → XP_038477533.1  nuclear transcription factor Y subunit gamma isoform X1

      Conserved Domains (1) summary
      COG5208
      Location:17 → 98
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      2338799..2405699 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038557732.1 → XP_038413660.1  nuclear transcription factor Y subunit gamma isoform X2

      UniProtKB/TrEMBL
      A0A8C0JQA3, A0A8C0PDK1, A0A8C0PHK5, A0A8I3NC83, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    2. XM_038557733.1 → XP_038413661.1  nuclear transcription factor Y subunit gamma isoform X2

      UniProtKB/TrEMBL
      A0A8C0JQA3, A0A8C0PDK1, A0A8C0PHK5, A0A8I3NC83, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    3. XM_038557731.1 → XP_038413659.1  nuclear transcription factor Y subunit gamma isoform X1

      UniProtKB/TrEMBL
      A0A8C0PHK5, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 98
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      2526350..2593255 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005628865.4 → XP_005628922.1  nuclear transcription factor Y subunit gamma isoform X2

      See identical proteins and their annotated locations for XP_005628922.1

      UniProtKB/TrEMBL
      A0A8C0JQA3, A0A8C0PDK1, A0A8C0PHK5, A0A8I3NC83, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    2. XM_850960.6 → XP_856053.1  nuclear transcription factor Y subunit gamma isoform X2

      See identical proteins and their annotated locations for XP_856053.1

      UniProtKB/TrEMBL
      A0A8C0JQA3, A0A8C0PDK1, A0A8C0PHK5, A0A8I3NC83, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 123
      HAP5; CCAAT-binding factor, subunit C [Transcription]

    3. XM_022427744.1 → XP_022283452.1  nuclear transcription factor Y subunit gamma isoform X1

      UniProtKB/TrEMBL
      A0A8C0PHK5, A0A8I3RWU0
      Conserved Domains (1) summary
      COG5208
      Location:17 → 98
      HAP5; CCAAT-binding factor, subunit C [Transcription]
    Nucleotide Protein
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