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    SLC5A6 solute carrier family 5 member 6 [ Canis lupus familiaris (dog) ]

    Gene ID: 475698, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SLC5A6provided by VGNC
    Official Full Name
    solute carrier family 5 member 6provided by VGNC
    Primary source
    VGNC:VGNC:46449
    See related
    Ensembl:ENSCAFG00845005860
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC5A6 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 17 NC_051821.1 (21502873..21515270, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 17 NC_006599.4 (21073728..21086105, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 17 NC_049238.1 (21247616..21259983, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 17 NC_049277.1 (21189666..21202032, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 17 NC_049758.1 (21200734..21213100, complement)

    Chromosome 17 - NC_051821.1Genomic Context describing neighboring genes Neighboring gene transcription factor 23 Neighboring gene U4 spliceosomal RNA Neighboring gene all-trans retinoic acid induced differentiation factor Neighboring gene carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase Neighboring gene solute carrier family 30 member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sodium-dependent multivitamin transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biotin transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pantothenate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-dependent multivitamin transporter
    Names
    solute carrier family 5 (sodium-dependent vitamin transporter), member 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051821.1 Reference ROS_Cfam_1.0

      Range
      21502873..21515270 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038691015.1 → XP_038546943.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Related
      ENSCAFP00845008070.1, ENSCAFT00845010384.1
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    2. XM_038691012.1 → XP_038546940.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Related
      ENSCAFP00845008101.1, ENSCAFT00845010425.1
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    3. XM_038691011.1 → XP_038546939.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    4. XM_038691014.1 → XP_038546942.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    5. XM_038691013.1 → XP_038546941.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    6. XM_038691009.1 → XP_038546937.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    7. XM_038691010.1 → XP_038546938.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049277.1 Alternate UMICH_Zoey_3.1

      Range
      21189666..21202032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038498512.1 → XP_038354440.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    2. XM_038498510.1 → XP_038354438.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    3. XM_038498513.1 → XP_038354441.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    4. XM_038498511.1 → XP_038354439.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    5. XM_038498514.1 → XP_038354442.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    6. XM_038498508.1 → XP_038354436.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    7. XM_038498509.1 → XP_038354437.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049758.1 Alternate UNSW_CanFamBas_1.0

      Range
      21200734..21213100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038625114.1 → XP_038481042.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    2. XM_038625112.1 → XP_038481040.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    3. XM_038625115.1 → XP_038481043.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    4. XM_038625113.1 → XP_038481041.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    5. XM_038625116.1 → XP_038481044.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    6. XM_038625110.1 → XP_038481038.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    7. XM_038625111.1 → XP_038481039.1  sodium-dependent multivitamin transporter

      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049238.1 Alternate UU_Cfam_GSD_1.0

      Range
      21247616..21259983 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038561066.1 → XP_038416994.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    2. XM_038561063.1 → XP_038416991.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    3. XM_038561062.1 → XP_038416990.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    4. XM_038561065.1 → XP_038416993.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    5. XM_038561064.1 → XP_038416992.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    6. XM_038561060.1 → XP_038416988.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    7. XM_038561061.1 → XP_038416989.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      21073728..21086105 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022404565.2 → XP_022260273.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    2. XM_014120385.3 → XP_013975860.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    3. XM_014120388.3 → XP_013975863.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    4. XM_014120384.3 → XP_013975859.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    5. XM_014120387.3 → XP_013975862.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    6. XM_005630253.4 → XP_005630310.1  sodium-dependent multivitamin transporter

      See identical proteins and their annotated locations for XP_005630310.1

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain

    7. XM_014120386.3 → XP_013975861.1  sodium-dependent multivitamin transporter

      UniProtKB/TrEMBL
      A0A8C0LFX9, A0A8C0MID4, A0A8C0S0C8, A0A8I3MY61
      Conserved Domains (1) summary
      cd11504
      Location:23 → 549
      SLC5sbd_SMVT; Na(+)/multivitamin cotransporter SMVT and related proteins; solute-binding domain
    Nucleotide Protein
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