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    TPGS2 tubulin polyglutamylase complex subunit 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 480156, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TPGS2provided by VGNC
    Official Full Name
    tubulin polyglutamylase complex subunit 2provided by VGNC
    Primary source
    VGNC:VGNC:47737
    See related
    Ensembl:ENSCAFG00845004346
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TPGS2 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (53359055..53426746)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (52814760..52882422)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (53358830..53426514)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (53043064..53110715)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (53066213..53133575)

    Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102153910 Neighboring gene CUGBP Elav-like family member 4 Neighboring gene KIAA1328 Neighboring gene protein SET-like Neighboring gene uncharacterized LOC119881557 Neighboring gene formin homology 2 domain containing 3 Neighboring gene U4 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein polyglutamylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tubulin polyglutamylase complex subunit 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051811.1 Reference ROS_Cfam_1.0

      Range
      53359055..53426746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038672264.1 → XP_038528192.1  tubulin polyglutamylase complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RBK6, A0A8I3RTI1
      Related
      ENSCAFP00845006254.1, ENSCAFT00845007931.1
      Conserved Domains (1) summary
      smart00860
      Location:75 → 180
      SMI1_KNR4; SMI1 / KNR4 family

    2. XM_038672263.1 → XP_038528191.1  tubulin polyglutamylase complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8I3MS35, A0A8P0NJB2
      Related
      ENSCAFP00845006200.1, ENSCAFT00845007831.1
      Conserved Domains (1) summary
      smart00860
      Location:75 → 223
      SMI1_KNR4; SMI1 / KNR4 family

    3. XM_038672265.1 → XP_038528193.1  tubulin polyglutamylase complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    4. XM_038672266.1 → XP_038528194.1  tubulin polyglutamylase complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    RNA

    1. XR_005430221.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049267.1 Alternate UMICH_Zoey_3.1

      Range
      53043064..53110715
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038482026.1 → XP_038337954.1  tubulin polyglutamylase complex subunit 2 isoform X2

      Conserved Domains (1) summary
      smart00860
      Location:75 → 180
      SMI1_KNR4; SMI1 / KNR4 family

    2. XM_038482025.1 → XP_038337953.1  tubulin polyglutamylase complex subunit 2 isoform X1

      Conserved Domains (1) summary
      smart00860
      Location:75 → 223
      SMI1_KNR4; SMI1 / KNR4 family

    3. XM_038482027.1 → XP_038337955.1  tubulin polyglutamylase complex subunit 2 isoform X3

      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    4. XM_038482028.1 → XP_038337956.1  tubulin polyglutamylase complex subunit 2 isoform X3

      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    RNA

    1. XR_005328662.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

      Range
      53066213..53133575
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038607576.1 → XP_038463504.1  tubulin polyglutamylase complex subunit 2 isoform X2

      Conserved Domains (1) summary
      smart00860
      Location:75 → 180
      SMI1_KNR4; SMI1 / KNR4 family

    2. XM_038607575.1 → XP_038463503.1  tubulin polyglutamylase complex subunit 2 isoform X1

      Conserved Domains (1) summary
      smart00860
      Location:75 → 223
      SMI1_KNR4; SMI1 / KNR4 family

    3. XM_038607577.1 → XP_038463505.1  tubulin polyglutamylase complex subunit 2 isoform X3

      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    RNA

    1. XR_005397016.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

      Range
      53358830..53426514
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038543469.1 → XP_038399397.1  tubulin polyglutamylase complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RBK6, A0A8I3RTI1
      Conserved Domains (1) summary
      smart00860
      Location:75 → 180
      SMI1_KNR4; SMI1 / KNR4 family

    2. XM_038543468.1 → XP_038399396.1  tubulin polyglutamylase complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8I3MS35, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:75 → 223
      SMI1_KNR4; SMI1 / KNR4 family

    3. XM_038543470.1 → XP_038399398.1  tubulin polyglutamylase complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    4. XM_038543472.1 → XP_038399400.1  tubulin polyglutamylase complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    RNA

    1. XR_005362500.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      52814760..52882422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005622861.4 → XP_005622918.1  tubulin polyglutamylase complex subunit 2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RBK6, A0A8I3RTI1
      Conserved Domains (1) summary
      smart00860
      Location:75 → 180
      SMI1_KNR4; SMI1 / KNR4 family

    2. XM_537279.7 → XP_537279.4  tubulin polyglutamylase complex subunit 2 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8I3MS35, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:75 → 223
      SMI1_KNR4; SMI1 / KNR4 family

    3. XM_014115453.3 → XP_013970928.1  tubulin polyglutamylase complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    4. XM_022421460.2 → XP_022277168.1  tubulin polyglutamylase complex subunit 2 isoform X3

      UniProtKB/TrEMBL
      A0A8C0KE56, A0A8C0QHY2, A0A8P0NJB2
      Conserved Domains (1) summary
      smart00860
      Location:2 → 144
      SMI1_KNR4; SMI1 / KNR4 family

    RNA

    1. XR_292793.4 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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