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    PHF23 PHD finger protein 23 [ Canis lupus familiaris (dog) ]

    Gene ID: 489465, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PHF23provided by VGNC
    Official Full Name
    PHD finger protein 23provided by VGNC
    Primary source
    VGNC:VGNC:44488
    See related
    Ensembl:ENSCAFG00845020187
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PHF23 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (32308259..32313378, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (32340941..32346052, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (32409527..32414643, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (32273557..32278662, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (32232584..32237690, complement)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase very long chain Neighboring gene microRNA mir-324 Neighboring gene dishevelled segment polarity protein 2 Neighboring gene GABA type A receptor-associated protein Neighboring gene uncharacterized LOC111095875 Neighboring gene CTD nuclear envelope phosphatase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of autophagosome maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      32308259..32313378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038665363.1 → XP_038521291.1  PHD finger protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K8U1, A0A8C0N325, A0A8I3S1K3
      Related
      ENSCAFP00845027846.1, ENSCAFT00845035596.1
      Conserved Domains (1) summary
      cd15631
      Location:341 → 384
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    2. XM_038665364.1 → XP_038521292.1  PHD finger protein 23 isoform X2

      Conserved Domains (1) summary
      cd15631
      Location:333 → 376
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      32273557..32278662 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038475471.1 → XP_038331399.1  PHD finger protein 23 isoform X1

      Conserved Domains (1) summary
      cd15631
      Location:341 → 384
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    2. XM_038475472.1 → XP_038331400.1  PHD finger protein 23 isoform X2

      Conserved Domains (1) summary
      cd15631
      Location:333 → 376
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      32232584..32237690 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038600822.1 → XP_038456750.1  PHD finger protein 23 isoform X1

      Conserved Domains (1) summary
      cd15631
      Location:341 → 384
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    2. XM_038600823.1 → XP_038456751.1  PHD finger protein 23 isoform X2

      Conserved Domains (1) summary
      cd15631
      Location:333 → 376
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      32409527..32414643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038536639.1 → XP_038392567.1  PHD finger protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K8U1, A0A8C0N325, A0A8I3S1K3
      Conserved Domains (1) summary
      cd15631
      Location:341 → 384
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    2. XM_038536640.1 → XP_038392568.1  PHD finger protein 23 isoform X2

      Conserved Domains (1) summary
      cd15631
      Location:333 → 376
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      32340941..32346052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038514768.1 → XP_038370696.1  PHD finger protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0K8U1, A0A8C0N325, A0A8I3S1K3
      Conserved Domains (1) summary
      cd15631
      Location:341 → 384
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)

    2. XM_005619964.4 → XP_005620021.1  PHD finger protein 23 isoform X2

      Conserved Domains (1) summary
      cd15631
      Location:333 → 376
      PHD_PHF23; PHD finger found in PHD finger protein 23 (PHF23)
    Nucleotide Protein
    Heading Accession and Version

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