SMIM20 small integral membrane protein 20 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: SMIM20provided by VGNC
Official Full Name: small integral membrane protein 20provided by VGNC
Primary source: VGNC:VGNC:53241
See related: Ensembl:ENSCAFG00845006127
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as: C3H4orf52
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	3	NC_051807.1 (85451073..85463991, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	3	NC_006585.4 (86993124..87005974, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	3	NC_049224.1 (85077331..85090191, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	3	NC_049263.1 (84572599..84585453, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	3	NC_049744.1 (84692674..84705528, complement)

Chromosome 3 - NC_051807.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Process	Evidence Code	Pubs
involved_in mitochondrial cytochrome c oxidase assembly	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: small integral membrane protein 20

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001145429.1 → NP_001138901.1 small integral membrane protein 20

Status: VALIDATED

Source sequence(s)

BQ233989, DN872659, DN904339

UniProtKB/TrEMBL

A0A8C0Q126, A0A8I3N203

Related

ENSCAFP00845008485.1, ENSCAFT00845010872.1

Conserved Domains (1) summary

pfam15061
Location:4 → 57

DUF4538; Domain of unknown function (DUF4538)

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051807.1 Reference ROS_Cfam_1.0

Range

85451073..85463991 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038660518.1 → XP_038516446.1 small integral membrane protein 20 isoform X2

Conserved Domains (1) summary

pfam15061
Location:4 → 36

DUF4538; Domain of unknown function (DUF4538)
XM_038660517.1 → XP_038516445.1 small integral membrane protein 20 isoform X1

Conserved Domains (1) summary

pfam15061
Location:4 → 38

DUF4538; Domain of unknown function (DUF4538)