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    VPS33A VPS33A core subunit of CORVET and HOPS complexes [ Canis lupus familiaris (dog) ]

    Gene ID: 477462, updated on 5-Mar-2024

    Summary

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    Official Symbol
    VPS33Aprovided by VGNC
    Official Full Name
    VPS33A core subunit of CORVET and HOPS complexesprovided by VGNC
    Primary source
    VGNC:VGNC:110105
    See related
    Ensembl:ENSCAFG00845022324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See VPS33A in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (7342147..7373504)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (7250848..7282200)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (7320923..7352308)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (7274298..7305672)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (7365289..7396615)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA9 Neighboring gene zinc finger CCHC-type containing 8 Neighboring gene uncharacterized LOC119866144 Neighboring gene CAP-Gly domain containing linker protein 1 Neighboring gene uncharacterized LOC119866145 Neighboring gene diablo IAP-binding mitochondrial protein Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CORVET complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 33A
    Names
    VPS33A, CORVET/HOPS core subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      7342147..7373504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038436534.1 → XP_038292462.1  vacuolar protein sorting-associated protein 33A isoform X1

      UniProtKB/TrEMBL
      A0A8C0KTH6, A0A8C0KVD6, A0A8C0TSZ8, A0A8C0TT13, A0A8I3PF57
      Related
      ENSCAFP00845030864.1, ENSCAFT00845039388.1
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 584
      Sec1; Sec1 family

    2. XM_038436535.1 → XP_038292463.1  vacuolar protein sorting-associated protein 33A isoform X2

      UniProtKB/TrEMBL
      A0A8C0KVD6, A0A8C0KVZ7, A0A8C0TT13
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 538
      Sec1; Sec1 family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      7274298..7305672
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038511453.1 → XP_038367381.1  vacuolar protein sorting-associated protein 33A isoform X1

      Conserved Domains (1) summary
      pfam00995
      Location:34 → 584
      Sec1; Sec1 family

    2. XM_038511454.1 → XP_038367382.1  vacuolar protein sorting-associated protein 33A isoform X2

      Conserved Domains (1) summary
      pfam00995
      Location:34 → 538
      Sec1; Sec1 family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      7365289..7396615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038639129.1 → XP_038495057.1  vacuolar protein sorting-associated protein 33A isoform X1

      Conserved Domains (1) summary
      pfam00995
      Location:34 → 584
      Sec1; Sec1 family

    2. XM_038639130.1 → XP_038495058.1  vacuolar protein sorting-associated protein 33A isoform X2

      Conserved Domains (1) summary
      pfam00995
      Location:34 → 538
      Sec1; Sec1 family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      7320923..7352308
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038574945.1 → XP_038430873.1  vacuolar protein sorting-associated protein 33A isoform X1

      UniProtKB/TrEMBL
      A0A8C0KTH6, A0A8C0KVD6, A0A8C0TSZ8, A0A8C0TT13, A0A8I3PF57
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 584
      Sec1; Sec1 family

    2. XM_038574947.1 → XP_038430875.1  vacuolar protein sorting-associated protein 33A isoform X2

      UniProtKB/TrEMBL
      A0A8C0KVD6, A0A8C0KVZ7, A0A8C0TT13
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 538
      Sec1; Sec1 family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      7250848..7282200
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_534660.7 → XP_534660.2  vacuolar protein sorting-associated protein 33A isoform X1

      UniProtKB/TrEMBL
      A0A8C0KTH6, A0A8C0KVD6, A0A8C0TSZ8, A0A8C0TT13, A0A8I3PF57
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 584
      Sec1; Sec1 family

    2. XM_022410707.2 → XP_022266415.1  vacuolar protein sorting-associated protein 33A isoform X2

      UniProtKB/TrEMBL
      A0A8C0KVD6, A0A8C0KVZ7, A0A8C0TT13
      Conserved Domains (1) summary
      pfam00995
      Location:34 → 538
      Sec1; Sec1 family
    Nucleotide Protein
    Heading Accession and Version

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