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    ALKBH2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase [ Canis lupus familiaris (dog) ]

    Gene ID: 477524, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ALKBH2provided by VGNC
    Official Full Name
    alkB homolog 2, alpha-ketoglutarate dependent dioxygenaseprovided by VGNC
    Primary source
    VGNC:VGNC:37803
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ALKBH2 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (18256208..18263098)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (17882716..17889612, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (18265421..18272096)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (18092011..18098900, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (18246822..18253708)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene acetyl-CoA carboxylase beta Neighboring gene uracil DNA glycosylase Neighboring gene ubiquitin specific peptidase 30 Neighboring gene 60S ribosomal protein L39-like Neighboring gene SV2 related protein Neighboring gene D-amino acid oxidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA oxidative demethylase ALKBH2
    Names
    alkB, alkylation repair homolog 2
    XP_005636389.1
    XP_005636390.1
    XP_013963352.1
    XP_022266252.1
    XP_038292940.1
    XP_038292941.1
    XP_038292942.1
    XP_038292943.1
    XP_038292944.1
    XP_038292945.1
    XP_038315362.1
    XP_038367809.1
    XP_038367810.1
    XP_038367811.1
    XP_038367812.1
    XP_038367813.1
    XP_038367814.1
    XP_038367816.1
    XP_038431348.1
    XP_038431349.1
    XP_038431350.1
    XP_038431351.1
    XP_038431352.1
    XP_038431353.1
    XP_038495530.1
    XP_038495531.1
    XP_038495532.1
    XP_038495533.1
    XP_038495534.1
    XP_038495535.1
    XP_038495536.1
    XP_534719.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      18256208..18263098
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038437016.1 → XP_038292944.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_038437017.1 → XP_038292945.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    3. XM_038437012.1 → XP_038292940.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_038437015.1 → XP_038292943.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038437013.1 → XP_038292941.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_038437014.1 → XP_038292942.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      18092011..18098900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038511886.1 → XP_038367814.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_038511884.1 → XP_038367812.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    3. XM_038511888.1 → XP_038367816.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_038511881.1 → XP_038367809.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038511885.1 → XP_038367813.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_038511882.1 → XP_038367810.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    7. XM_038511883.1 → XP_038367811.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      18246822..18253708
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038639605.1 → XP_038495533.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_038639606.1 → XP_038495534.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    3. XM_038639608.1 → XP_038495536.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_038639602.1 → XP_038495530.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_038639603.1 → XP_038495531.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_038639604.1 → XP_038495532.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    7. XM_038639607.1 → XP_038495535.1  DNA oxidative demethylase ALKBH2

      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      18265421..18272096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038575424.1 → XP_038431352.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0PKL8

    2. XM_038575423.1 → XP_038431351.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0PKL8

    3. XM_038575420.1 → XP_038431348.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0PKL8

    4. XM_038575421.1 → XP_038431349.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0PKL8

    5. XM_038575422.1 → XP_038431350.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0PKL8

    6. XM_038575425.1 → XP_038431353.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0PKL8

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      17882716..17889612 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038459434.1 → XP_038315362.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    2. XM_005636333.4 → XP_005636390.1  DNA oxidative demethylase ALKBH2

      See identical proteins and their annotated locations for XP_005636390.1

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    3. XM_534719.7 → XP_534719.2  DNA oxidative demethylase ALKBH2

      See identical proteins and their annotated locations for XP_534719.2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    4. XM_022410544.2 → XP_022266252.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    5. XM_005636332.4 → XP_005636389.1  DNA oxidative demethylase ALKBH2

      See identical proteins and their annotated locations for XP_005636389.1

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

    6. XM_014107877.3 → XP_013963352.1  DNA oxidative demethylase ALKBH2

      UniProtKB/TrEMBL
      A0A8C0L9B7, A0A8C0TKV5
      Conserved Domains (1) summary
      cl21496
      Location:60 → 249
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
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