U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TCHP trichoplein keratin filament binding [ Canis lupus familiaris (dog) ]

    Gene ID: 477521, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TCHPprovided by VGNC
    Official Full Name
    trichoplein keratin filament bindingprovided by VGNC
    Primary source
    VGNC:VGNC:47202
    See related
    Ensembl:ENSCAFG00845021777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TCHP in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (17568254..17587693, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (18558972..18578387)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (17575340..17594540, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (18768981..18788164)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (17558082..17577293, complement)

    Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 13A Neighboring gene U4 spliceosomal RNA Neighboring gene GIT ArfGAP 2 Neighboring gene glycolipid transfer protein Neighboring gene transient receptor potential cation channel subfamily V member 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in keratin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trichoplein keratin filament-binding protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051830.1 Reference ROS_Cfam_1.0

      Range
      17568254..17587693 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038436973.1 → XP_038292901.1  trichoplein keratin filament-binding protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0TNU1, A0A8I3S567
      Related
      ENSCAFP00845030074.1, ENSCAFT00845038413.1
      Conserved Domains (1) summary
      pfam13868
      Location:165 → 495
      TPH; Trichohyalin-plectin-homology domain

    RNA

    1. XR_005302467.1 RNA Sequence

    2. XR_005302466.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049286.1 Alternate UMICH_Zoey_3.1

      Range
      18768981..18788164
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038511922.1 → XP_038367850.1  trichoplein keratin filament-binding protein isoform X1

    RNA

    1. XR_005345559.1 RNA Sequence

    2. XR_005345558.1 RNA Sequence

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

      Range
      17558082..17577293 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038639566.1 → XP_038495494.1  trichoplein keratin filament-binding protein isoform X2

    RNA

    1. XR_005413105.1 RNA Sequence

    2. XR_005413104.1 RNA Sequence

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

      Range
      17575340..17594540 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038575381.1 → XP_038431309.1  trichoplein keratin filament-binding protein isoform X3

      UniProtKB/TrEMBL
      A0A8C0LBT1, A0A8P0TPK9

    RNA

    1. XR_005379282.1 RNA Sequence

    2. XR_005379281.1 RNA Sequence

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      18558972..18578387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_534716.7 → XP_534716.3  trichoplein keratin filament-binding protein isoform X4

      UniProtKB/TrEMBL
      A0A8C0LBT1, A0A8P0TPK9
      Conserved Domains (1) summary
      pfam13868
      Location:148 → 478
      TPH; Trichohyalin-plectin-homology domain

    RNA

    1. XR_295739.4 RNA Sequence

    2. XR_002619585.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous