UBE3B ubiquitin protein ligase E3B [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: UBE3Bprovided by VGNC
Official Full Name: ubiquitin protein ligase E3Bprovided by VGNC
Primary source: VGNC:VGNC:48069
See related: Ensembl:ENSCAFG00845022953
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 26

Exon count:: 30

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	26	NC_051830.1 (17886506..17941365, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	26	NC_006608.4 (18204297..18259142)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	26	NC_049247.1 (17895038..17949934, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	26	NC_049286.1 (18413524..18468344)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	26	NC_049767.1 (17877005..17930256, complement)

Chromosome 26 - NC_051830.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

MARC_12083-12084:1008774253:1 (e-PCR)
- UniSTS:267333

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables ubiquitin protein ligase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein polyubiquitination	IEA Inferred from Electronic Annotation more info	PubMed
involved_in ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: ubiquitin-protein ligase E3B

XP_038292911.1

EC 2.3.2.26

XP_038292912.1

EC 2.3.2.26

XP_038292913.1

EC 2.3.2.26

XP_038314940.1

EC 2.3.2.26

XP_038314941.1

EC 2.3.2.26

XP_038367830.1

EC 2.3.2.26

XP_038367831.1

EC 2.3.2.26

XP_038431319.1

EC 2.3.2.26

XP_038431320.1

EC 2.3.2.26

XP_038431321.1

EC 2.3.2.26

XP_038495498.1

EC 2.3.2.26

XP_038495499.1

EC 2.3.2.26

XP_038495500.1

EC 2.3.2.26

XP_543437.3

EC 2.3.2.26

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051830.1 Reference ROS_Cfam_1.0

Range

17886506..17941365 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038436983.1 → XP_038292911.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Related

ENSCAFP00845031877.1, ENSCAFT00845040723.1

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038436984.1 → XP_038292912.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038436985.1 → XP_038292913.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

Alternate UMICH_Zoey_3.1

Genomic

NC_049286.1 Alternate UMICH_Zoey_3.1

Range

18413524..18468344

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038511903.1 → XP_038367831.1 ubiquitin-protein ligase E3B isoform X3
XM_038511902.1 → XP_038367830.1 ubiquitin-protein ligase E3B isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049767.1 Alternate UNSW_CanFamBas_1.0

Range

17877005..17930256 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038639570.1 → XP_038495498.1 ubiquitin-protein ligase E3B isoform X1

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038639571.1 → XP_038495499.1 ubiquitin-protein ligase E3B isoform X1

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038639572.1 → XP_038495500.1 ubiquitin-protein ligase E3B isoform X1

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049247.1 Alternate UU_Cfam_GSD_1.0

Range

17895038..17949934 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038575391.1 → XP_038431319.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038575392.1 → XP_038431320.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038575393.1 → XP_038431321.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

18204297..18259142

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_543437.7 → XP_543437.3 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038459012.1 → XP_038314940.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...
XM_038459013.1 → XP_038314941.1 ubiquitin-protein ligase E3B isoform X1

UniProtKB/TrEMBL

A0A8C0TLX9, A0A8I3PI06

Conserved Domains (1) summary

cd00078
Location:682 → 1066

HECTc; HECT domain; C-terminal catalytic domain of a subclass of Ubiquitin-protein ligase (E3). It binds specific ubiquitin-conjugating enzymes (E2), accepts ubiquitin from E2, transfers ubiquitin to substrate lysine side chains, and transfers additional ...