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    ACTL6A actin like 6A [ Canis lupus familiaris (dog) ]

    Gene ID: 478637, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ACTL6Aprovided by VGNC
    Official Full Name
    actin like 6Aprovided by VGNC
    Primary source
    VGNC:VGNC:37542
    See related
    Ensembl:ENSCAFG00845016262
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ACTL6A in Genome Data Viewer
    Location:
    chromosome: 34
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 34 NC_051838.1 (12858403..12886719)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 34 NC_006616.4 (17102646..17130954)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 34 NC_049255.1 (13132262..13160666)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 34 NC_049294.1 (12909490..12937878)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 34 NC_049775.1 (12891830..12920136)

    Chromosome 34 - NC_051838.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119867489 Neighboring gene 60S ribosomal protein L11-like Neighboring gene mitochondrial ribosomal protein L47 Neighboring gene SIN3-HDAC complex-associated factor-like Neighboring gene NADH:ubiquinone oxidoreductase subunit B5 Neighboring gene 40S ribosomal protein S26-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of NuA4 histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    actin-like protein 6A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051838.1 Reference ROS_Cfam_1.0

      Range
      12858403..12886719
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038445601.1 → XP_038301529.1  actin-like protein 6A isoform X2

      UniProtKB/TrEMBL
      A0A8C0LCE2, A0A8C0NUW2, A0A8C0T8A5, A0A8I3NUK7
      Related
      ENSCAFP00845022745.1, ENSCAFT00845028906.1
      Conserved Domains (1) summary
      pfam00022
      Location:11 → 429
      Actin

    2. XM_038445602.1 → XP_038301530.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    3. XM_038445600.1 → XP_038301528.1  actin-like protein 6A isoform X1

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8I3RZ83
      Related
      ENSCAFP00845022777.1, ENSCAFT00845028949.1
      Conserved Domains (1) summary
      pfam00022
      Location:35 → 453
      Actin

    4. XM_038445604.1 → XP_038301532.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    5. XM_038445603.1 → XP_038301531.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049294.1 Alternate UMICH_Zoey_3.1

      Range
      12909490..12937878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038519781.1 → XP_038375709.1  actin-like protein 6A isoform X2

      Conserved Domains (1) summary
      pfam00022
      Location:11 → 429
      Actin

    2. XM_038519782.1 → XP_038375710.1  actin-like protein 6A isoform X3

      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    3. XM_038519780.1 → XP_038375708.1  actin-like protein 6A isoform X1

      Conserved Domains (1) summary
      pfam00022
      Location:35 → 453
      Actin

    4. XM_038519784.1 → XP_038375712.1  actin-like protein 6A isoform X3

      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    5. XM_038519783.1 → XP_038375711.1  actin-like protein 6A isoform X3

      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049775.1 Alternate UNSW_CanFamBas_1.0

      Range
      12891830..12920136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038647833.1 → XP_038503761.1  actin-like protein 6A isoform X2

      Conserved Domains (1) summary
      pfam00022
      Location:11 → 429
      Actin

    2. XM_038647834.1 → XP_038503762.1  actin-like protein 6A isoform X3

      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    3. XM_038647832.1 → XP_038503760.1  actin-like protein 6A isoform X1

      Conserved Domains (1) summary
      pfam00022
      Location:35 → 453
      Actin

    4. XM_038647836.1 → XP_038503764.1  actin-like protein 6A isoform X3

      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    5. XM_038647835.1 → XP_038503763.1  actin-like protein 6A isoform X3

      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049255.1 Alternate UU_Cfam_GSD_1.0

      Range
      13132262..13160666
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038583420.1 → XP_038439348.1  actin-like protein 6A isoform X2

      UniProtKB/TrEMBL
      A0A8C0LCE2, A0A8C0NUW2, A0A8C0T8A5, A0A8I3NUK7
      Conserved Domains (1) summary
      pfam00022
      Location:11 → 429
      Actin

    2. XM_038583421.1 → XP_038439349.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    3. XM_038583419.1 → XP_038439347.1  actin-like protein 6A isoform X1

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8I3RZ83
      Conserved Domains (1) summary
      pfam00022
      Location:35 → 453
      Actin

    4. XM_038583423.1 → XP_038439351.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    5. XM_038583422.1 → XP_038439350.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006616.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      17102646..17130954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038462875.1 → XP_038318803.1  actin-like protein 6A isoform X2

      UniProtKB/TrEMBL
      A0A8C0LCE2, A0A8C0NUW2, A0A8C0T8A5, A0A8I3NUK7
      Conserved Domains (1) summary
      pfam00022
      Location:11 → 429
      Actin

    2. XM_005639730.4 → XP_005639787.1  actin-like protein 6A isoform X3

      See identical proteins and their annotated locations for XP_005639787.1

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    3. XM_038462874.1 → XP_038318802.1  actin-like protein 6A isoform X1

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8I3RZ83
      Conserved Domains (1) summary
      pfam00022
      Location:35 → 453
      Actin

    4. XM_038462876.1 → XP_038318804.1  actin-like protein 6A isoform X3

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin

    5. XM_005639731.4 → XP_005639788.1  actin-like protein 6A isoform X3

      See identical proteins and their annotated locations for XP_005639788.1

      UniProtKB/TrEMBL
      A0A8C0NUW2, A0A8C0T696
      Conserved Domains (1) summary
      pfam00022
      Location:17 → 387
      Actin
    Nucleotide Protein
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