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    CLRN3 clarin 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 611600, updated on 5-Mar-2024

    Summary

    Official Symbol
    CLRN3provided by VGNC
    Official Full Name
    clarin 3provided by VGNC
    Primary source
    VGNC:VGNC:39361
    See related
    Ensembl:ENSCAFG00845027851
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
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    Genomic context

    See CLRN3 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (37351065..37366148, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (36775045..36790108, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (37080684..37095782, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (36831220..36846275, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (36826012..36841046, complement)

    Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866538 Neighboring gene uncharacterized LOC119866539 Neighboring gene uncharacterized LOC111093087 Neighboring gene protein tyrosine phosphatase receptor type E Neighboring gene marker of proliferation Ki-67

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051832.1 Reference ROS_Cfam_1.0

      Range
      37351065..37366148 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038440924.1XP_038296852.1  clarin-3

      UniProtKB/TrEMBL
      A0A8C0L1L4, A0A8C0TIZ8, A0A8I3Q646
      Related
      ENSCAFP00845038558.1, ENSCAFT00845049143.1

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049288.1 Alternate UMICH_Zoey_3.1

      Range
      36831220..36846275 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038515520.1XP_038371448.1  clarin-3

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

      Range
      36826012..36841046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038643345.1XP_038499273.1  clarin-3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

      Range
      37080684..37095782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038579110.1XP_038435038.1  clarin-3

      UniProtKB/TrEMBL
      A0A8C0L1L4, A0A8C0TIZ8, A0A8I3Q646

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      36775045..36790108 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_849282.6XP_854375.1  clarin-3

      UniProtKB/TrEMBL
      A0A8C0L1L4, A0A8C0TIZ8, A0A8I3Q646