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    SEPTIN1 septin 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 489900, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SEPTIN1provided by VGNC
    Official Full Name
    septin 1provided by VGNC
    Primary source
    VGNC:VGNC:46010
    See related
    Ensembl:ENSCAFG00845014164
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    SEPT1
    Orthologs
    human mouse all
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    Genomic context

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    See SEPTIN1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (17846389..17850406)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (19289544..19293553)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (17877697..17881714)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (17646593..17650610)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (17562034..17566041)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene dCTP pyrophosphatase 1 Neighboring gene zinc finger protein 771 Neighboring gene zinc finger protein 48 Neighboring gene myosin light chain 11 Neighboring gene TBC1 domain family member 10B Neighboring gene sesquipedalian-1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell division site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of septin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in septin ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    septin-1
    XP_005621345.1
    XP_022275567.1
    XP_038334500.1
    XP_038334501.1
    XP_038395743.1
    XP_038395744.1
    XP_038459823.1
    XP_038459824.1
    XP_038524548.1
    XP_038524549.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      17846389..17850406
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038668621.1 → XP_038524549.1  septin-1 isoform X2

      Conserved Domains (1) summary
      cl40481
      Location:25 → 253
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_038668620.1 → XP_038524548.1  septin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KZI6, A0A8C0M3U6, A0A8C0SKS0, A0A8I3NN77, A0A8P0NHZ2
      Related
      ENSCAFP00845020054.1, ENSCAFT00845025458.1
      Conserved Domains (1) summary
      pfam00735
      Location:25 → 298
      Septin

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      17646593..17650610
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038478573.1 → XP_038334501.1  septin-1 isoform X2

      Conserved Domains (1) summary
      cl40481
      Location:25 → 253
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_038478572.1 → XP_038334500.1  septin-1 isoform X1

      Conserved Domains (1) summary
      pfam00735
      Location:25 → 298
      Septin

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      17562034..17566041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603896.1 → XP_038459824.1  septin-1 isoform X2

      Conserved Domains (1) summary
      cl40481
      Location:25 → 253
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_038603895.1 → XP_038459823.1  septin-1 isoform X1

      Conserved Domains (1) summary
      pfam00735
      Location:25 → 298
      Septin

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      17877697..17881714
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539816.1 → XP_038395744.1  septin-1 isoform X2

      Conserved Domains (1) summary
      cl40481
      Location:25 → 253
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_038539815.1 → XP_038395743.1  septin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KZI6, A0A8C0M3U6, A0A8C0SKS0, A0A8I3NN77, A0A8P0NHZ2
      Conserved Domains (1) summary
      pfam00735
      Location:25 → 298
      Septin

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      19289544..19293553
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022419859.2 → XP_022275567.1  septin-1 isoform X2

      Conserved Domains (1) summary
      cl40481
      Location:25 → 253
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. XM_005621288.4 → XP_005621345.1  septin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KZI6, A0A8C0M3U6, A0A8C0SKS0, A0A8I3NN77, A0A8P0NHZ2
      Conserved Domains (1) summary
      pfam00735
      Location:25 → 298
      Septin
    Nucleotide Protein
    Heading Accession and Version

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