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    ATP6V0D1 ATPase H+ transporting V0 subunit d1 [ Canis lupus familiaris (dog) ]

    Gene ID: 479685, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ATP6V0D1provided by VGNC
    Official Full Name
    ATPase H+ transporting V0 subunit d1provided by VGNC
    Primary source
    VGNC:VGNC:38273
    See related
    Ensembl:ENSCAFG00845008188
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ATP6V0D1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (82361885..82401257)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (81916255..81955624)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (82512585..82551949)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (82188035..82227401)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (81869135..81908503)

    Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene RHO family interacting cell polarization regulator 1 Neighboring gene uncharacterized LOC106558863 Neighboring gene agouti related neuropeptide Neighboring gene hydroxysteroid 11-beta dehydrogenase 2 Neighboring gene zinc finger DHHC-type containing 1 Neighboring gene leucine rich repeat containing 36

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vacuolar acidification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vacuolar transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of plasma membrane proton-transporting V-type ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of proton-transporting V-type ATPase, V0 domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of vacuolar proton-transporting V-type ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V-type proton ATPase subunit d 1
    XP_038333333.1
    XP_038394542.1
    XP_038458656.1
    XP_038523264.1
    XP_536816.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051809.1 Reference ROS_Cfam_1.0

      Range
      82361885..82401257
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038667336.1 → XP_038523264.1  V-type proton ATPase subunit d 1

      UniProtKB/TrEMBL
      A0A8C0KW26, A0A8C0YZP4, A0A8I3MX68, A0A8I3NAA2
      Related
      ENSCAFP00845011155.1, ENSCAFT00845014404.1
      Conserved Domains (1) summary
      pfam01992
      Location:16 → 344
      vATP-synt_AC39; ATP synthase (C/AC39) subunit

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049265.1 Alternate UMICH_Zoey_3.1

      Range
      82188035..82227401
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038477405.1 → XP_038333333.1  V-type proton ATPase subunit d 1

      Conserved Domains (1) summary
      pfam01992
      Location:16 → 344
      vATP-synt_AC39; ATP synthase (C/AC39) subunit

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

      Range
      81869135..81908503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038602728.1 → XP_038458656.1  V-type proton ATPase subunit d 1

      Conserved Domains (1) summary
      pfam01992
      Location:16 → 344
      vATP-synt_AC39; ATP synthase (C/AC39) subunit

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

      Range
      82512585..82551949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038538614.1 → XP_038394542.1  V-type proton ATPase subunit d 1

      UniProtKB/TrEMBL
      A0A8C0KW26, A0A8C0YZP4, A0A8I3MX68, A0A8I3NAA2
      Conserved Domains (1) summary
      pfam01992
      Location:16 → 344
      vATP-synt_AC39; ATP synthase (C/AC39) subunit

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      81916255..81955624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536816.7 → XP_536816.2  V-type proton ATPase subunit d 1

      UniProtKB/TrEMBL
      A0A8C0KW26, A0A8C0YZP4, A0A8I3MX68, A0A8I3NAA2
      Conserved Domains (1) summary
      pfam01992
      Location:16 → 344
      vATP-synt_AC39; ATP synthase (C/AC39) subunit
    Nucleotide Protein
    Heading Accession and Version

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