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    KLHL40 kelch like family member 40 [ Canis lupus familiaris (dog) ]

    Gene ID: 485616, updated on 5-Mar-2024

    Summary

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    Official Symbol
    KLHL40provided by VGNC
    Official Full Name
    kelch like family member 40provided by VGNC
    Primary source
    VGNC:VGNC:52888
    See related
    Ensembl:ENSCAFG00845020457
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    KBTBD5
    Orthologs
    human mouse all
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    Genomic context

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    See KLHL40 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (12103227..12110087)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (11788054..11794913)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (12051398..12058303)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (11905185..11912008)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (12047337..12054167)

    Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene natural killer cell triggering receptor Neighboring gene uncharacterized LOC100688360 Neighboring gene zinc finger and BTB domain containing 47 Neighboring gene uncharacterized LOC106557617 Neighboring gene hedgehog acyltransferase like Neighboring gene coiled-coil domain containing 13 Neighboring gene HIG1 hypoxia inducible domain family member 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skeletal muscle fiber development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in A band IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in I band IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kelch-like protein 40
    Names
    kelch repeat and BTB (POZ) domain containing 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051827.1 Reference ROS_Cfam_1.0

      Range
      12103227..12110087
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038432034.1 → XP_038287962.1  kelch-like protein 40

      UniProtKB/TrEMBL
      A0A8C0LLM9, A0A8C0NDE6, A0A8I3S1R3
      Related
      ENSCAFP00845028207.1, ENSCAFT00845036041.1
      Conserved Domains (4) summary
      PHA03098
      Location:47 → 599
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:407 → 453
      Kelch; KELCH repeat [structural motif]
      cl38908
      Location:6 → 137
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      cl28903
      Location:128 → 230
      BACK; BACK (BTB and C-terminal Kelch) domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049283.1 Alternate UMICH_Zoey_3.1

      Range
      11905185..11912008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038507347.1 → XP_038363275.1  kelch-like protein 40

      Conserved Domains (4) summary
      PHA03098
      Location:47 → 599
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:407 → 453
      Kelch; KELCH repeat [structural motif]
      cl38908
      Location:6 → 137
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      cl28903
      Location:128 → 230
      BACK; BACK (BTB and C-terminal Kelch) domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

      Range
      12047337..12054167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038634762.1 → XP_038490690.1  kelch-like protein 40

      Conserved Domains (4) summary
      PHA03098
      Location:47 → 599
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:407 → 453
      Kelch; KELCH repeat [structural motif]
      cl38908
      Location:6 → 137
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      cl28903
      Location:128 → 230
      BACK; BACK (BTB and C-terminal Kelch) domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

      Range
      12051398..12058303
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038570580.1 → XP_038426508.1  kelch-like protein 40

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      11788054..11794913
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542735.8 → XP_542735.5  kelch-like protein 40

      UniProtKB/TrEMBL
      A0A8C0LLM9, A0A8C0NDE6, A0A8I3S1R3
      Conserved Domains (4) summary
      PHA03098
      Location:47 → 599
      PHA03098; kelch-like protein; Provisional
      sd00038
      Location:407 → 453
      Kelch; KELCH repeat [structural motif]
      cl38908
      Location:6 → 137
      BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
      cl28903
      Location:128 → 230
      BACK; BACK (BTB and C-terminal Kelch) domain
    Nucleotide Protein
    Heading Accession and Version

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