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    NR1D2 nuclear receptor subfamily 1 group D member 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 485643, updated on 5-Mar-2024

    Summary

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    Official Symbol
    NR1D2provided by VGNC
    Official Full Name
    nuclear receptor subfamily 1 group D member 2provided by VGNC
    Primary source
    VGNC:VGNC:43941
    See related
    Ensembl:ENSCAFG00845019679
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See NR1D2 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 23 NC_051827.1 (20065641..20094314, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 23 NC_006605.4 (19757060..19785724, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 23 NC_049244.1 (20099576..20128270, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 23 NC_049283.1 (19880835..19909714, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 23 NC_049764.1 (19990566..20019259, complement)

    Chromosome 23 - NC_051827.1Genomic Context describing neighboring genes Neighboring gene thyroid hormone receptor beta Neighboring gene uncharacterized LOC119865369 Neighboring gene 60S ribosomal protein L26-like Neighboring gene NFKB inhibitor interacting Ras like 1 Neighboring gene ribosomal protein L15 Neighboring gene ubiquitin conjugating enzyme E2 E1 Neighboring gene cell division cycle-associated protein 3-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 1 group D member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051827.1 Reference ROS_Cfam_1.0

      Range
      20065641..20094314 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038432160.1 → XP_038288088.1  nuclear receptor subfamily 1 group D member 2

      UniProtKB/TrEMBL
      A0A8C0LK72, A0A8C0P4D9, A0A8I3PFC6
      Related
      ENSCAFP00845027170.1, ENSCAFT00845034690.1
      Conserved Domains (2) summary
      cd06940
      Location:386 → 574
      NR_LBD_REV_ERB; The ligand binding domain of REV-ERB receptors, members of the nuclear receptor superfamily
      cd07166
      Location:98 → 186
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049283.1 Alternate UMICH_Zoey_3.1

      Range
      19880835..19909714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038507460.1 → XP_038363388.1  nuclear receptor subfamily 1 group D member 2

      Conserved Domains (2) summary
      cd06940
      Location:386 → 574
      NR_LBD_REV_ERB; The ligand binding domain of REV-ERB receptors, members of the nuclear receptor superfamily
      cd07166
      Location:98 → 186
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049764.1 Alternate UNSW_CanFamBas_1.0

      Range
      19990566..20019259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038634888.1 → XP_038490816.1  nuclear receptor subfamily 1 group D member 2

      Conserved Domains (2) summary
      cd06940
      Location:386 → 574
      NR_LBD_REV_ERB; The ligand binding domain of REV-ERB receptors, members of the nuclear receptor superfamily
      cd07166
      Location:98 → 186
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049244.1 Alternate UU_Cfam_GSD_1.0

      Range
      20099576..20128270 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038570706.1 → XP_038426634.1  nuclear receptor subfamily 1 group D member 2

      UniProtKB/TrEMBL
      A0A8C0LK72, A0A8C0P4D9, A0A8I3PFC6
      Conserved Domains (2) summary
      cd06940
      Location:386 → 574
      NR_LBD_REV_ERB; The ligand binding domain of REV-ERB receptors, members of the nuclear receptor superfamily
      cd07166
      Location:98 → 186
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006605.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      19757060..19785724 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542763.7 → XP_542763.2  nuclear receptor subfamily 1 group D member 2

      UniProtKB/TrEMBL
      A0A8C0LK72, A0A8C0P4D9, A0A8I3PFC6
      Conserved Domains (2) summary
      cd06940
      Location:386 → 574
      NR_LBD_REV_ERB; The ligand binding domain of REV-ERB receptors, members of the nuclear receptor superfamily
      cd07166
      Location:98 → 186
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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