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    Ugt1a1 UDP glucuronosyltransferase 1 family, polypeptide A1 [ Mus musculus (house mouse) ]

    Gene ID: 394436, updated on 16-Apr-2024

    Summary

    Official Symbol
    Ugt1a1provided by MGI
    Official Full Name
    UDP glucuronosyltransferase 1 family, polypeptide A1provided by MGI
    Primary source
    MGI:MGI:98898
    See related
    Ensembl:ENSMUSG00000089960 AllianceGenome:MGI:98898
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gnt1; UgtBr1; UGT1A01; Udpgt-1a; UDPGT 1-1
    Summary
    Predicted to enable several functions, including glucuronosyltransferase activity; protein dimerization activity; and retinoic acid binding activity. Predicted to be involved in several processes, including biphenyl catabolic process; cellular glucuronidation; and negative regulation of cellular glucuronidation. Is integral component of plasma membrane. Part of endoplasmic reticulum chaperone complex. Is expressed in alimentary system; nervous system; and urinary system. Human ortholog(s) of this gene implicated in several diseases, including bilirubin metabolic disorder (multiple); cholecystolithiasis; cholelithiasis; female reproductive organ cancer (multiple); and hepatitis B. Orthologous to human UGT1A1 (UDP glucuronosyltransferase family 1 member A1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in kidney adult (RPKM 233.7), liver adult (RPKM 207.2) and 9 other tissues See more
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    Genomic context

    See Ugt1a1 in Genome Data Viewer
    Location:
    1 D; 1 44.55 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (88139681..88147724)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (88211959..88220002)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene UDP glycosyltransferase 1 family, polypeptide A10 Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A9 Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A8 Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A7C Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A6B Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A6A Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A5 Neighboring gene predicted gene 15376 Neighboring gene STARR-positive B cell enhancer mm9_chr1:90112870-90113171 Neighboring gene STARR-positive B cell enhancer mm9_chr1:90113610-90113910 Neighboring gene STARR-seq mESC enhancer starr_01629 Neighboring gene STARR-positive B cell enhancer mm9_chr1:90118277-90118578 Neighboring gene UDP glucuronosyltransferase 1 family, polypeptide A2 Neighboring gene DnaJ heat shock protein family (Hsp40) member B3 Neighboring gene maestro heat-like repeat family member 2A Neighboring gene STARR-positive B cell enhancer mm9_chr1:90185502-90185802 Neighboring gene STARR-positive B cell enhancer mm9_chr1:90186563-90186863 Neighboring gene Holliday junction recognition protein Neighboring gene STARR-positive B cell enhancer mm9_chr1:90195708-90196009 Neighboring gene transient receptor potential cation channel, subfamily M, member 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables enzyme binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables enzyme binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables enzyme inhibitor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables glucuronosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    enables glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables retinoic acid binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables steroid binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in biphenyl catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in cellular glucuronidation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cellular glucuronidation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in estrogen metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in flavone metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in flavonoid glucuronidation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of cellular glucuronidation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in response to organic substance ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in xenobiotic glucuronidation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of cytochrome complex ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    part_of endoplasmic reticulum chaperone complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    UDP-glucuronosyltransferase 1A1
    Names
    UDP-glucuronosyltransferase 1 family, member 1
    UDP-glucuronosyltransferase 1-1
    UDPGT
    UGT1*1
    UGT1-01
    UGT1.1
    NP_964007.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_201645.2NP_964007.2  UDP-glucuronosyltransferase 1A1 precursor

      See identical proteins and their annotated locations for NP_964007.2

      Status: VALIDATED

      Source sequence(s)
      AA674349, AC087780, AI097692
      Consensus CDS
      CCDS15143.1
      UniProtKB/Swiss-Prot
      Q561M6, Q63886, Q6XL50
      UniProtKB/TrEMBL
      J7HWK0
      Related
      ENSMUSP00000072803.7, ENSMUST00000073049.7
      Conserved Domains (2) summary
      PHA03392
      Location:20507
      egt; ecdysteroid UDP-glucosyltransferase; Provisional
      pfam00201
      Location:30526
      UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      88139681..88147724
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)