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    NID1 nidogen 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711154, updated on 5-Mar-2024

    Summary

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    Official Symbol
    NID1provided by VGNC
    Official Full Name
    nidogen 1provided by VGNC
    Primary source
    VGNC:VGNC:75349
    See related
    Ensembl:ENSMMUG00000012716
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See NID1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (12965381..13060658)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (212253387..212348439, complement)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 137B Neighboring gene aconitate hydratase, mitochondrial pseudogene Neighboring gene uncharacterized LOC114678808 Neighboring gene uncharacterized LOC114678804 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC114678814

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nidogen-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      12965381..13060658
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015126951.2 → XP_014982437.2  nidogen-1

      UniProtKB/TrEMBL
      F7DF16, I0FHS6, I2CVX5
      Related
      ENSMMUP00000016697.4, ENSMMUT00000017831.4
      Conserved Domains (8) summary
      smart00135
      Location:1014 → 1055
      LY; Low-density lipoprotein-receptor YWTD domain
      smart00179
      Location:710 → 751
      EGF_CA; Calcium-binding EGF-like domain
      smart00539
      Location:106 → 269
      NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
      cd00255
      Location:429 → 660
      nidG2; Nidogen, G2 domain; Nidogen is an important component of the basement membrane, an extracellular sheet-like matrix. Nidogen is a multifunctional protein that interacts with many other basement membrane proteins, like collagen, perlecan, lamin, and has a ...
      pfam00058
      Location:992 → 1029
      Ldl_recept_b; Low-density lipoprotein receptor repeat class B
      pfam12947
      Location:811 → 839
      EGF_3; EGF domain
      pfam00086
      Location:849 → 919
      Thyroglobulin_1; Thyroglobulin type-1 repeat
      pfam14670
      Location:1212 → 1236
      FXa_inhibition; Coagulation Factor Xa inhibitory site
    Nucleotide Protein
    Heading Accession and Version

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