trmt61a.L tRNA methyltransferase 61A L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: trmt61a.L
Official Full Name: tRNA methyltransferase 61A L homeolog
Primary source: Xenbase:XB-GENE-957986
Locus tag: XELAEV_18039725mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: trmt61a
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Genomic context

Location:: chromosome: 8L

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	8L	NC_054385.1 (89529801..89554397)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	8L	NC_030738.1 (74821766..74846544)

Chromosome 8L - NC_054385.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables methyltransferase activity	IEA Inferred from Electronic Annotation more info
enables tRNA (adenine(58)-N1)-methyltransferase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within methylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within tRNA methylation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within tRNA processing	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of tRNA (m1A) methyltransferase complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: tRNA methyltransferase 61A L homeolog

Names: tRNA methyltransferase 61 homolog A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001085957.1 → NP_001079426.1 tRNA methyltransferase 61A L homeolog

See identical proteins and their annotated locations for NP_001079426.1

Status: PROVISIONAL

Source sequence(s)

BC042219

UniProtKB/TrEMBL

A0A974C849, Q8AVK7

Conserved Domains (1) summary

pfam08704
Location:64 → 300

GCD14; tRNA methyltransferase complex GCD14 subunit

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

89529801..89554397

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041571890.1 → XP_041427824.1 tRNA methyltransferase 61A L homeolog isoform X1

UniProtKB/TrEMBL

A0A974C849, Q8AVK7

Conserved Domains (1) summary

pfam08704
Location:64 → 300

GCD14; tRNA methyltransferase complex GCD14 subunit