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    LOC484082 T-complex protein 10A homolog 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 484082, updated on 22-Jan-2024

    Summary

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    Gene symbol
    LOC484082
    Gene description
    T-complex protein 10A homolog 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    TCP10L2
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    Genomic context

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    See LOC484082 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (55176193..55200735)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (55784902..55809444)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (55547120..55571353)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (55073101..55097643)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (54921550..54946405)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene C-C motif chemokine receptor 6 Neighboring gene G protein-coupled receptor 31 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene uncharacterized LOC111095973 Neighboring gene tubulin tyrosine ligase like 2 Neighboring gene unc-93 homolog A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in centriole elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: T-complex protein 10A homolog 2; T-complex protein 10A homolog 2; uncharacterized protein LOC484082
    Names
    t-complex 10 like 2, pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      55176193..55200735
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654634.1 → XP_038510562.1  T-complex protein 10A homolog 2 isoform X2

      Conserved Domains (1) summary
      pfam07202
      Location:400 → 433
      Tcp10_C; T-complex protein 10 C-terminus

    2. XM_038654635.1 → XP_038510563.1  uncharacterized protein LOC484082 isoform X3

      UniProtKB/TrEMBL
      A0A8C0Q7S7
      Conserved Domains (1) summary
      pfam07202
      Location:332 → 364
      Tcp10_C; T-complex protein 10 C-terminus

    3. XM_038654633.1 → XP_038510561.1  T-complex protein 10A homolog 2 isoform X1

      Conserved Domains (1) summary
      pfam07202
      Location:436 → 468
      Tcp10_C; T-complex protein 10 C-terminus

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      55073101..55097643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038465866.1 → XP_038321794.1  T-complex protein 10A homolog 2 isoform X2

      Conserved Domains (1) summary
      pfam07202
      Location:400 → 433
      Tcp10_C; T-complex protein 10 C-terminus

    2. XM_038465867.1 → XP_038321795.1  uncharacterized protein LOC484082 isoform X3

      Conserved Domains (1) summary
      pfam07202
      Location:332 → 364
      Tcp10_C; T-complex protein 10 C-terminus

    3. XM_038465865.1 → XP_038321793.1  T-complex protein 10A homolog 2 isoform X1

      Conserved Domains (1) summary
      pfam07202
      Location:436 → 468
      Tcp10_C; T-complex protein 10 C-terminus

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      54921550..54946405
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038590837.1 → XP_038446765.1  T-complex protein 10A homolog 2 isoform X2

    2. XM_038590838.1 → XP_038446766.1  uncharacterized protein LOC484082 isoform X3

      Conserved Domains (1) summary
      pfam07202
      Location:332 → 364
      Tcp10_C; T-complex protein 10 C-terminus

    3. XM_038590836.1 → XP_038446764.1  T-complex protein 10A homolog 2 isoform X1

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      55547120..55571353
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038526545.1 → XP_038382473.1  LOW QUALITY PROTEIN: T-complex protein 10A homolog 2 isoform X1

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      55784902..55809444
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038533382.1 → XP_038389310.1  T-complex protein 10A homolog 2 isoform X2

      Conserved Domains (1) summary
      pfam07202
      Location:400 → 433
      Tcp10_C; T-complex protein 10 C-terminus

    2. XM_022418966.2 → XP_022274674.1  uncharacterized protein LOC484082 isoform X3

      UniProtKB/TrEMBL
      A0A8C0Q7S7
      Conserved Domains (1) summary
      pfam07202
      Location:332 → 364
      Tcp10_C; T-complex protein 10 C-terminus

    3. XM_022418955.2 → XP_022274663.1  T-complex protein 10A homolog 2 isoform X1

      Conserved Domains (1) summary
      pfam07202
      Location:436 → 468
      Tcp10_C; T-complex protein 10 C-terminus
    Nucleotide Protein
    Heading Accession and Version

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