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    CMTR1 cap methyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 421434, updated on 11-Apr-2024

    Summary

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    Symbol
    CMTR1provided by CGNC
    Full Name
    cap methyltransferase 1provided by CGNC
    Primary source
    CGNC:7714
    See related
    Ensembl:ENSGALG00010020548
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    FTSJD2
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (29846408..29871150, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (29773915..29798633, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene MAM domain containing glycosylphosphatidylinositol anchor 1 Neighboring gene coiled-coil domain containing 167 Neighboring gene ring finger protein 8 Neighboring gene alanyl-tRNA synthetase 2, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • KIAA0082

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA (nucleoside-2'-O-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 7-methylguanosine mRNA capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
    Names
    FtsJ methyltransferase domain containing 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      29846408..29871150 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_419486.8 → XP_419486.3  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

      UniProtKB/TrEMBL
      A0A8V0ZDM0
      Related
      ENSGALP00010029316.1, ENSGALT00010049624.1
      Conserved Domains (3) summary
      pfam01585
      Location:83 → 125
      G-patch; G-patch domain
      pfam01728
      Location:228 → 444
      FtsJ; FtsJ-like methyltransferase
      cl12015
      Location:619 → 712
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases

    2. XM_015283793.4 → XP_015139279.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

      UniProtKB/TrEMBL
      A0A8V0ZDM0
      Conserved Domains (3) summary
      pfam01585
      Location:83 → 125
      G-patch; G-patch domain
      pfam01728
      Location:228 → 444
      FtsJ; FtsJ-like methyltransferase
      cl12015
      Location:619 → 712
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      29773915..29798633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667600.2 → XP_040523534.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

      UniProtKB/TrEMBL
      A0A8V0ZDM0
      Conserved Domains (3) summary
      pfam01585
      Location:83 → 125
      G-patch; G-patch domain
      pfam01728
      Location:228 → 444
      FtsJ; FtsJ-like methyltransferase
      cl12015
      Location:619 → 712
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases

    2. XM_040667601.2 → XP_040523535.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

      UniProtKB/TrEMBL
      A0A8V0ZDM0
      Conserved Domains (3) summary
      pfam01585
      Location:83 → 125
      G-patch; G-patch domain
      pfam01728
      Location:228 → 444
      FtsJ; FtsJ-like methyltransferase
      cl12015
      Location:619 → 712
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
    Nucleotide Protein Strain
    Heading Accession and Version

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