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    RIDA reactive intermediate imine deaminase A homolog [ Canis lupus familiaris (dog) ]

    Gene ID: 475043, updated on 5-Mar-2024

    Summary

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    Official Symbol
    RIDAprovided by VGNC
    Official Full Name
    reactive intermediate imine deaminase A homologprovided by VGNC
    Primary source
    VGNC:VGNC:56076
    See related
    Ensembl:ENSCAFG00845024508
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (497322..509637, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (342375..354474, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (454739..467052, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (340907..353035, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (448689..460999, complement)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098484 Neighboring gene glutamate rich 5 Neighboring gene POP1 homolog, ribonuclease P/MRP subunit Neighboring gene NIPA like domain containing 2 Neighboring gene uncharacterized LOC111098485

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in organonitrogen compound catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ribonuclease UK114; 2-iminobutanoate/2-iminopropanoate deaminase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      497322..509637 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038684655.1 → XP_038540583.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X2

      Conserved Domains (1) summary
      cl10015
      Location:51 → 103
      YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...

    2. XM_038684653.1 → XP_038540581.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X1

      UniProtKB/TrEMBL
      A0A8C0LWQ9, A0A8C0SGZ7, A0A8I3PQP9
      Related
      ENSCAFP00845033920.1, ENSCAFT00845043280.1
      Conserved Domains (1) summary
      TIGR00004
      Location:6 → 129
      TIGR00004; reactive intermediate/imine deaminase

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      340907..353035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038492872.1 → XP_038348800.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X2

      Conserved Domains (1) summary
      cl10015
      Location:51 → 103
      YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...

    2. XM_038492871.1 → XP_038348799.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X1

      Conserved Domains (1) summary
      TIGR00004
      Location:6 → 129
      TIGR00004; reactive intermediate/imine deaminase

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

      Range
      448689..460999 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038619033.1 → XP_038474961.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X2

      Conserved Domains (1) summary
      cl10015
      Location:51 → 103
      YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...

    2. XM_038619032.1 → XP_038474960.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X1

      Conserved Domains (1) summary
      TIGR00004
      Location:6 → 129
      TIGR00004; reactive intermediate/imine deaminase

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      454739..467052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038555144.1 → XP_038411072.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X2

      Conserved Domains (1) summary
      cl10015
      Location:51 → 103
      YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...

    2. XM_038555143.1 → XP_038411071.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X1

      UniProtKB/TrEMBL
      A0A8C0LWQ9, A0A8C0SGZ7, A0A8I3PQP9
      Conserved Domains (1) summary
      TIGR00004
      Location:6 → 129
      TIGR00004; reactive intermediate/imine deaminase

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      342375..354474 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022426551.2 → XP_022282259.1  2-iminobutanoate/2-iminopropanoate deaminase isoform X2

      Conserved Domains (1) summary
      cl10015
      Location:51 → 103
      YjgF_YER057c_UK114_family; YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function. The conserved domain is similar in structure to chorismate mutase but there is no sequence similarity and no ...

    2. XM_532278.7 → XP_532278.4  2-iminobutanoate/2-iminopropanoate deaminase isoform X1

      UniProtKB/TrEMBL
      A0A8C0LWQ9, A0A8C0SGZ7, A0A8I3PQP9
      Conserved Domains (1) summary
      TIGR00004
      Location:6 → 129
      TIGR00004; reactive intermediate/imine deaminase
    Nucleotide Protein
    Heading Accession and Version

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