U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    HAGHL hydroxyacylglutathione hydrolase like [ Canis lupus familiaris (dog) ]

    Gene ID: 490087, updated on 5-Mar-2024

    Summary

    Official Symbol
    HAGHLprovided by VGNC
    Official Full Name
    hydroxyacylglutathione hydrolase likeprovided by VGNC
    Primary source
    VGNC:VGNC:41586
    See related
    Ensembl:ENSCAFG00845026324
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (40197115..40200176, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (41118702..41121047, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (40324873..40327218, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (39885785..39888129, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (39845998..39848343, complement)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096335 Neighboring gene cytosolic iron-sulfur assembly component 3 Neighboring gene coiled-coil domain containing 78 Neighboring gene adenine nucleotide translocase lysine methyltransferase Neighboring gene meteorin, glial cell differentiation regulator

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    hydroxyacylglutathione hydrolase-like protein
    NP_001191148.1
    XP_038523536.1
    XP_038523537.1
    XP_038523538.1
    XP_038523539.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001204219.1NP_001191148.1  hydroxyacylglutathione hydrolase-like protein

      See identical proteins and their annotated locations for NP_001191148.1

      Status: VALIDATED

      Source sequence(s)
      DN392338, DN745758, JAAUVH010000065
      UniProtKB/TrEMBL
      A0A8C0K7E7, A0A8C0PXR7, A0A8C0RJD9, A0A8I3PTN8
      Related
      ENSCAFP00845036450.1, ENSCAFT00845046419.1
      Conserved Domains (1) summary
      PLN02469
      Location:1257
      PLN02469; hydroxyacylglutathione hydrolase

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      40197115..40200176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038667608.1XP_038523536.1  hydroxyacylglutathione hydrolase-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0K7E7, A0A8C0PXR7, A0A8C0RJD9, A0A8I3PTN8
      Conserved Domains (1) summary
      PLN02469
      Location:1257
      PLN02469; hydroxyacylglutathione hydrolase
    2. XM_038667611.1XP_038523539.1  hydroxyacylglutathione hydrolase-like protein isoform X4

      Conserved Domains (1) summary
      cd07723
      Location:4172
      hydroxyacylglutathione_hydrolase_MBL-fold; hydroxyacylglutathione hydrolase, MBL-fold metallo-hydrolase domain
    3. XM_038667609.1XP_038523537.1  hydroxyacylglutathione hydrolase-like protein isoform X2

      UniProtKB/TrEMBL
      A0A8C0PXR7
      Conserved Domains (1) summary
      PLN02469
      Location:1256
      PLN02469; hydroxyacylglutathione hydrolase
    4. XM_038667610.1XP_038523538.1  hydroxyacylglutathione hydrolase-like protein isoform X3

      Conserved Domains (1) summary
      cd07723
      Location:4173
      hydroxyacylglutathione_hydrolase_MBL-fold; hydroxyacylglutathione hydrolase, MBL-fold metallo-hydrolase domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      39885785..39888129 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      39845998..39848343 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      40324873..40327218 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      41118702..41121047 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)