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    TNPO3 transportin 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 482263, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TNPO3provided by VGNC
    Official Full Name
    transportin 3provided by VGNC
    Primary source
    VGNC:VGNC:47696
    See related
    Ensembl:ENSCAFG00845020947
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TNPO3 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (7405066..7488297)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (7326495..7409297)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (7497117..7580541)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (7610134..7693338)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (7352085..7435363)

    Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 33 Neighboring gene uncharacterized LOC119867510 Neighboring gene ATP synthase F(0) complex subunit C3, mitochondrial-like Neighboring gene interferon regulatory factor 5 Neighboring gene kielin cysteine rich BMP regulator

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transportin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051818.1 Reference ROS_Cfam_1.0

      Range
      7405066..7488297
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038686178.1 → XP_038542106.1  transportin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0R605, A0A8P0PMV1
      Related
      ENSCAFP00845029124.1, ENSCAFT00845037190.1
      Conserved Domains (2) summary
      smart00913
      Location:33 → 96
      IBN_N; Importin-beta N-terminal domain
      pfam08389
      Location:121 → 248
      Xpo1; Exportin 1-like protein

    2. XM_038686179.1 → XP_038542107.1  transportin-3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0R605, A0A8I3P7E7, A0A8P0NU55
      Related
      ENSCAFP00845029363.1, ENSCAFT00845037477.1
      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049274.1 Alternate UMICH_Zoey_3.1

      Range
      7610134..7693338
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494263.1 → XP_038350191.1  transportin-3 isoform X1

      Conserved Domains (2) summary
      smart00913
      Location:33 → 96
      IBN_N; Importin-beta N-terminal domain
      pfam08389
      Location:121 → 248
      Xpo1; Exportin 1-like protein

    2. XM_038494264.1 → XP_038350192.1  transportin-3 isoform X2

      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

      Range
      7352085..7435363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038620492.1 → XP_038476420.1  transportin-3 isoform X1

      Conserved Domains (2) summary
      smart00913
      Location:33 → 96
      IBN_N; Importin-beta N-terminal domain
      pfam08389
      Location:121 → 248
      Xpo1; Exportin 1-like protein

    2. XM_038620493.1 → XP_038476421.1  transportin-3 isoform X2

      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

      Range
      7497117..7580541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556558.1 → XP_038412486.1  transportin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0R605, A0A8P0PMV1
      Conserved Domains (2) summary
      smart00913
      Location:33 → 96
      IBN_N; Importin-beta N-terminal domain
      pfam08389
      Location:121 → 248
      Xpo1; Exportin 1-like protein

    2. XM_038556559.1 → XP_038412487.1  transportin-3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0R605, A0A8I3P7E7, A0A8P0NU55
      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      7326495..7409297
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014119056.3 → XP_013974531.1  transportin-3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0R605, A0A8P0PMV1
      Conserved Domains (2) summary
      smart00913
      Location:33 → 96
      IBN_N; Importin-beta N-terminal domain
      pfam08389
      Location:121 → 248
      Xpo1; Exportin 1-like protein

    2. XM_014119057.3 → XP_013974532.1  transportin-3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0R605, A0A8I3P7E7, A0A8P0NU55
      Conserved Domains (1) summary
      pfam08389
      Location:55 → 182
      Xpo1; Exportin 1-like protein
    Nucleotide Protein
    Heading Accession and Version

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