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Submitted SNP(ss) Details: ss1067855           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-21526
RefSNP(rs#)rs192339
Submitted Batch IDOVLP-000804-19
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC009643 SequenceAccession1:AC009643 SequenceVersion1:3 SequenceContigName1:Contig19 SequenceContigPosition1:31260 SequenceLocalName2:AC024295 SequenceAccession2:AC024295 SequenceVersion2:2 SequenceContigName2:Contig16 SequenceContigPosition2:7861 PolyBayesConfidence:81

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1067855|allelePos=440|len=540|taxid=9606|alleles='G/A'|mol=Genomic
 ACCAGCATAC GCTGTCTATT GCTTTCTTAT CTTGCATGCT TTATGAAGCT agccgccatg
 ttggagaaac ctgcatggca aggaactgag ggtggctttt ggccaaccgc ccttgagtta
 ctgaattctg ctaactgcca tgtgaataat tttggaagct gatctttccc cagttgaacc
 ttgagattac cacaacttag ctggcacctt gactgccgcc tatgagagat cctgaagtgg
 aggatcagct atgctgtatc caggttcctg atccatgtaa actgtgaaat aataaatgtg
 tattgtctta gccactaagt tttgggggta atctgtcatg tagcaataga taactaatgc
 aTGTACTTTT ATAATGGGGA ACACAATCAC GTGTTAATGG AATCAATTTC AAATTTTTTT
 TTCTAGCGTA TGCTTTCAA
 R
 GAACCCATGC AACTTTACTC TGAACCTCAA TTAAGTTTCT ATATTCTAAA ATTGGATTTG
 GGACCTATTC TGGTCTACTG ACTATTCTTT GAGTCAGGAG

  Submitted Frequency for ss1067855 back to top
There is no frequency submission for ss1067855.


  dbSNP summary of Genotypes for ss1067855 back to top
No sufficient data to compute Hardy-weinberg probability for ss1067855.


  Submitted individual genotype for ss1067855 back to top
There is no individual genotype data for ss1067855.

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