NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss1067858           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-24451
RefSNP(rs#)rs813992
Submitted Batch IDOVLP-000804-19
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC024897 SequenceAccession1:AC024897 SequenceVersion1:12 SequenceContigName1:Contig9 SequenceContigPosition1:1337 SequenceLocalName2:AC024991 SequenceAccession2:AC024991 SequenceVersion2:2 SequenceContigName2:Contig23 SequenceContigPosition2:3645 PolyBayesConfidence:81

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1067858|allelePos=101|len=201|taxid=9606|alleles='A/G'|mol=Genomic
 TTCATCTATG AGCAACGTAT GTTATCTCTT TAAGTATTTT TTATTATTTT ATCAAATATT
 GCTTTTTATT AATTACAGCA TAGATCTAAC CTGGTTTCTG
 R
 CCTTTAATCA CAGAAGAGAC ATAATTCATT AATTAAATAA ACTATAATGA TTACTGAGTT
 AACATGGGAC ATCAATAAGA CATAGTCCAT GAGTATAAGA

  Submitted Frequency for ss1067858 back to top
There is no frequency submission for ss1067858.


  dbSNP summary of Genotypes for ss1067858 back to top
No sufficient data to compute Hardy-weinberg probability for ss1067858.


  Submitted individual genotype for ss1067858 back to top
There is no individual genotype data for ss1067858.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement