NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss118963223           
Submitter
HandleILLUMINA-UK
Submitter SNP IDNA18507_000000017_NCBI36.1_chr10_116402
RefSNP(rs#)rs1984905
Submitted Batch IDILLUMINA_WTSI:NA18507_c10
Submitted DateJan 21, 2009
Publication Cited18987734
First entry to dbSNPJan 21 2009 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodILLUMINA SEQUENCING
Ascertainment Samplesize2
PopulationYRI
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss118963223|allelePos=251|len=501|taxid=9606|alleles='T/C'|mol=Genomic
 CAGGCACTGA GCAGAGGGAT CCTTCCTCCC TGAAGCTGCC CCTGAGCCTC CATCCAGAGA
 GGACCTCCAA CCACTACTAG GGCCCGTTCT CAGGAGGTTC AGTCCCAGAC AAGGGTTCCA
 GAGACTTAAG TCCATTTTCC CAAAATGGAC ATGATGCATA TGGCAAGTCA GGGACTTAGA
 ACGTCCAGGA CCAAGCCTTG CTGAGGACGG AAGGGAGCAA CGTGCCCTGG AGGTCCTCAT
 GCAGCCCGGA
 Y
 CTCTGGCAGT GACCAGCCAG CACCCAGGCA TCTCCTTGCT GGGTCTCCAA GCCCTGATGG
 TCACAGAAAA GGCCACAGGC CAGGGCTGGG ATGGGCCCAG GGCTCTGTGT GTTTCCTGGG
 AGGGATGAGG GGTGGCATCC CCCGTAGCAG CTCGAGGCTC AGTAGTCACT GCTGTTACTG
 CTGCCCTCTG AGTCTGGGGG AGCTGGCCTG GTGGGGCACA TGGGGGCCCA GTCCTCCTGT
 GGCAGATAGG

  Submitted Frequency for ss118963223 back to top
There is no frequency submission for ss118963223.


  dbSNP summary of Genotypes for ss118963223 back to top
No sufficient data to compute Hardy-weinberg probability for ss118963223.


  Submitted individual genotype for ss118963223 back to top
There is no individual genotype data for ss118963223.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement